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SCN18_14_9_16_R1_B_scaffold_1184

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1184_1
Emiliania huxleyi, Emiliania, Isochrysidales, Eukaryota

Not on your lists

2..286
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOD14472.1, ECO:0000313|EnsemblProtists:EOD14472}; TaxID=280463 species="Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliania.;" source="Emiliania huxleyi CCMP1516.;"
SCN18_14_9_16_R1_B_scaffold_1184_2
unknown

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283..1074
DNA (792bp) protein (264aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1184_3
unknown

Not on your lists

1239..1985
DNA (747bp) protein (249aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1184_4
unknown

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comp(2049..2240)
DNA (192bp) protein (64aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1184_5
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2243..2899)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LUR1_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY13951.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
SCN18_14_9_16_R1_B_scaffold_1184_6
SCNPILOT_SOLID2_TRIM150_Chryseobacterium_39_38, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3191..4114
DNA (924bp) protein (308aa)
Peptidase M23B n=1 Tax=Alteromonas macleodii (strain Black Sea 11) RepID=K0D5U0_ALTMS
peptidase M23B
Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
SCN18_14_9_16_R1_B_scaffold_1184_7
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4597..5217
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UKN6_ANASK
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
SCN18_14_9_16_R1_B_scaffold_1184_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5406..5756)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3T1_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ26449.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
SCN18_14_9_16_R1_B_scaffold_1184_9
SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, Kapabacteria

Not on your lists

comp(5880..7682)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2B6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF08151.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1184_10
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(7791..8924)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U6A3_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:KFE72397.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1184_11
CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, Eukaryote

Not on your lists

comp(8921..10066)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XMQ9_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF06307.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1184_12
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

Not on your lists

comp(10056..10796)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQ00_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96827.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1184_13
SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10793..11326)
DNA (534bp) protein (178aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQ03_SORC5
ECF family RNA polymerase sigma factor
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN96828.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1184_14
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11399..12340)
DNA (942bp) protein (314aa)
Hemagglutinin domain protein n=5 Tax=Burkholderia mallei RepID=Q62CV6_BURMA
hemagglutinin domain-containing protein
SCN18_14_9_16_R1_B_scaffold_1184_15
unknown

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13026..13292
DNA (267bp) protein (89aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1184_16
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13572..13958
DNA (387bp) protein (129aa)
RNA-binding region RNP-1 (RNA recognition motif) n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EYW0_SORC5
RNA recognition motif-containing protein
RNA-binding region RNP-1 (RNA recognition motif) {ECO:0000313|EMBL:CAN97579.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1184_17
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

Not on your lists

comp(14050..14922)
DNA (873bp) protein (291aa)
Conserved domain protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D2Q2_MYXXD
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:ABF92718.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
SCN18_14_9_16_R1_B_scaffold_1184_18
SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14929..16284)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Cellvibrio sp. BR RepID=I3IDW9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIK46254.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1184_19
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16281..17276)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI0003818813
Uncharacterized protein {ECO:0000313|EMBL:ERK89713.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
hypothetical protein
Displaying 19 items

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