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SCN18_14_9_16_R1_B_scaffold_1230

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1230_1
unknown

Not on your lists

comp(1..228)
DNA (228bp) protein (76aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1230_2
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

412..1251
DNA (840bp) protein (280aa)
Beta-lactamase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQI7_SORCE
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AGP34100.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1230_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1535..2359
DNA (825bp) protein (275aa)
RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ETK0_SORC5
RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715, ECO:0000313|EMBL:CAN91015.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1230_4
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2672..4543
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLN7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34097.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1230_5
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

Not on your lists

4556..6484
DNA (1929bp) protein (643aa)
SCN18_14_9_16_R1_B_scaffold_1230_6
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

Not on your lists

6648..8924
DNA (2277bp) protein (759aa)
SCN18_14_9_16_R1_B_scaffold_1230_7
SCNPILOT_EXPT_500_BF_STEP10_Flavobacteriia_38_13, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8953..9300
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LPS8_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY15441.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
SCN18_14_9_16_R1_B_scaffold_1230_8
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

9659..10012
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037C45EA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
SCN18_14_9_16_R1_B_scaffold_1230_9
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10321..11139)
DNA (819bp) protein (273aa)
Putative phosphonate-binding protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PRH9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF07448.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
putative phosphonate-binding protein
SCN18_14_9_16_R1_B_scaffold_1230_10
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11244..11999)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MMY6_CORCM
hypothetical protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
SCN18_14_9_16_R1_B_scaffold_1230_11
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12121..12633
DNA (513bp) protein (171aa)
Putative lipoprotein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C9G0_MYXFH
Rare lipoprotein A {ECO:0000313|EMBL:EYF00155.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
lipoprotein
SCN18_14_9_16_R1_B_scaffold_1230_12
unknown

Not on your lists

comp(12691..13407)
DNA (717bp) protein (239aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1230_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13485..14174)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XGV3_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP32352.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1230_14
SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14330..14956
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVX8_SORCE
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:AKF11179.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1230_15
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14940..15776
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZA0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM80984.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1230_16
unknown

Not on your lists

15860..16978
DNA (1119bp) protein (373aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1230_17
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17039..18292
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFW9_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF06307.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1230_18
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

18337..19596
DNA (1260bp) protein (420aa)
Glucosyltransferase-I n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GN82_SORC5
glucosyltransferase-I
Glucosyltransferase-I {ECO:0000313|EMBL:CAN93546.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1230_19
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

19593..20804
DNA (1212bp) protein (404aa)
Glucosyltransferase-I n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GN82_SORC5
glucosyltransferase-I
Glucosyltransferase-I {ECO:0000313|EMBL:CAN93546.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1230_20
SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, Gemmatimonadetes, Bacteria

Not on your lists

20819..22183
DNA (1365bp) protein (455aa)
BNR repeat-containing protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LPL7_HALO1
BNR repeat-containing protein
BNR repeat-containing protein {ECO:0000313|EMBL:ACY15380.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
SCN18_14_9_16_R1_B_scaffold_1230_21
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22192..23994
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2B6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF08149.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1230_22
unknown

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comp(24058..25104)
DNA (1047bp) protein (349aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1230_23
unknown

Not on your lists

comp(25401..25985)
DNA (585bp) protein (195aa)

This feature has no annotations

Displaying 23 items

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