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SCN18_14_9_16_R1_B_scaffold_1386

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1386_1
SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, Kapabacteria

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628..1905
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2B6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF08149.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1386_2
SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, Gemmatimonadetes, Bacteria

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1934..3196
DNA (1263bp) protein (421aa)
Bnr repeat-containing protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F9L8_VERMA
RCC1 repeat protein {ECO:0000313|EMBL:EEP73608.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
bnr repeat-containing protein
SCN18_14_9_16_R1_B_scaffold_1386_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3266..3673)
DNA (408bp) protein (136aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FTZ4_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF04037.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1386_4
SCNPILOT_CONT_750_P_Acinetobacter_38_24_partial, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3670..4773)
DNA (1104bp) protein (368aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08P54_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KFE67184.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1386_5
Tetranychus urticae, Tetranychus, Acari, Arthropoda, Metazoa

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comp(4866..5777)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Tetranychus urticae RepID=T1JU83_TETUR
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:tetur01g16884.1}; TaxID=32264 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Acariformes; Trombidiformes; Prostigmata; Eleutherengona; Raphignathae; Tetranychoidea; Tetranychidae; Tetranychus.;" source="Tetranychus urticae (Two-spotted spider mite).;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1386_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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6188..7264
DNA (1077bp) protein (359aa)
Type I restriction-modification system methyltransferase subunit n=1 Tax=Pseudomonas sp. GM55 RepID=J3GS05_9PSED
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:EJM73400.1}; TaxID=1144333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM55.;"
type I restriction-modification protein subunit M
SCN18_14_9_16_R1_B_scaffold_1386_7
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7261..7884
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM55 RepID=J2TGZ6_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJM73399.1}; TaxID=1144333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM55.;"
SCN18_14_9_16_R1_B_scaffold_1386_8
Nitrosospira multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7889..8872)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Streptomyces sp. SA3_actG RepID=UPI0001FFF460
Putative rhomboid family protein {ECO:0000313|EMBL:EGJ75996.1}; TaxID=355249 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu6071.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1386_9
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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9088..11232
DNA (2145bp) protein (715aa)
Diguanylate cyclase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XKA5_SORCE
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AGP32959.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1386_10
unknown

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11325..11699
DNA (375bp) protein (125aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1386_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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11802..13076
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRB5_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF01671.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1386_12
Rhodanobacter denitrificans_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_69_165, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13254..15296
DNA (2043bp) protein (681aa)
Putative membrane protein id=3354184 bin=GWA2_Elusimicrobia_66_18 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
SCN18_14_9_16_R1_B_scaffold_1386_13
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15378..15896)
DNA (519bp) protein (173aa)
Membrane protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y690_SORCE
membrane protein
Membrane protein {ECO:0000313|EMBL:AGP39745.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1386_14
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16306..16989)
DNA (684bp) protein (228aa)
Membrane protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5K5_SORCE
membrane protein
Membrane protein {ECO:0000313|EMBL:AGP39746.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1386_15
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(17082..17861)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZU2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36163.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1386_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17872..19059
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Nocardiopsis salina RepID=UPI00034848D1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39896.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1386_17
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

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19455..20261
DNA (807bp) protein (269aa)
Trypsin n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EPT3_SORC5
trypsin
Trypsin {ECO:0000313|EMBL:CAN94051.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Displaying 17 items

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