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SCN18_14_9_16_R1_B_scaffold_1392

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1392_1
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..2569)
DNA (2568bp) protein (856aa)
TPR domain protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FDL8_SORC5
hypothetical protein
TPR domain protein {ECO:0000313|EMBL:CAN91774.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1392_2
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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comp(2718..4583)
DNA (1866bp) protein (622aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNC8_SORCE
Serine/threonine protein kinase {ECO:0000313|EMBL:AKF07818.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1392_3
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4663..6699
DNA (2037bp) protein (679aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJL8_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33372.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1392_4
SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, Actinobacteria, Actinobacteria, Bacteria

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comp(6737..7384)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y073_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP38882.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1392_5
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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7664..7906
DNA (243bp) protein (81aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
DNA-directed RNA polymerase subunit omega n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ESX3_SORC5
DNA-directed RNA polymerase subunit omega
SCN18_14_9_16_R1_B_scaffold_1392_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7870..8775
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ESW9_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97426.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1392_7
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

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8772..9449
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YF23_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41483.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1392_8
scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, scnpilot_dereplicated_Mobile_Alphaproteobacteria_1, Mobile_element

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9656..10450
DNA (795bp) protein (265aa)
AraC family transcriptional regulator n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CGH7_MYXFH
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AEI68712.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
SCN18_14_9_16_R1_B_scaffold_1392_9
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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10518..11726
DNA (1209bp) protein (403aa)
Monooxygenase, FAD-binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASK7_RUBXD
monooxygenase
Monooxygenase, FAD-binding protein {ECO:0000313|EMBL:ABG05621.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
SCN18_14_9_16_R1_B_scaffold_1392_10
unknown

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comp(11739..12011)
DNA (273bp) protein (91aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1392_11
unknown

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12012..12152
DNA (141bp) protein (47aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1392_12
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12264..13178)
DNA (915bp) protein (305aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF03129.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
SCN18_14_9_16_R1_B_scaffold_1392_13
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13192..14589)
DNA (1398bp) protein (466aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IGQ1_9CHLR
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:EFO79638.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
Serine / threonine protein kinase
SCN18_14_9_16_R1_B_scaffold_1392_14
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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comp(14586..15257)
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LG17_SYNFM
hypothetical protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
Displaying 14 items

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