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SCN18_14_9_16_R1_B_scaffold_1424

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1424_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..115)
DNA (114bp) protein (38aa)
SCN18_14_9_16_R1_B_scaffold_1424_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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189..392
DNA (204bp) protein (68aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=463794 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens BBc6R8.;"
Histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Pseudomonas fluorescens BBc6R8 RepID=V7EDV6_PSEFL
SCN18_14_9_16_R1_B_scaffold_1424_3
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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960..2102
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YA19_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41171.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1424_4
unknown

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comp(2144..3112)
DNA (969bp) protein (323aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1424_5
unknown

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comp(3186..4646)
DNA (1461bp) protein (487aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1424_6
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

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comp(4803..5984)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AEE0B
Uncharacterized protein {ECO:0000313|EMBL:EEF61202.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1424_7
scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, Eukaryote

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comp(6330..7868)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ERV4_SORC5
PE-PGRS family protein {ECO:0000313|EMBL:EYF02433.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1424_8
unknown

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8154..8714
DNA (561bp) protein (187aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1424_9
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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comp(8830..10335)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5B9_SORCE
Type I secretion outer membrane protein, TolC {ECO:0000313|EMBL:AKF10459.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1424_10
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10328..11533)
DNA (1206bp) protein (402aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000313|EMBL:EYF08496.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Export ABC transporter permease protein id=4340429 bin=GWF2_Planctomycetes_50_10 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
ABC transporter permease
SCN18_14_9_16_R1_B_scaffold_1424_11
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11535..12257)
DNA (723bp) protein (241aa)
ABC transporter related n=1 Tax=Shewanella frigidimarina (strain NCIMB 400) RepID=Q083A2_SHEFN
ABC transporter related protein {ECO:0000313|EMBL:EYF08495.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
ABC transporter
SCN18_14_9_16_R1_B_scaffold_1424_12
SCNPILOT_EXPT_750_P_Thiobacillus_65_1100, SCNPILOT_EXPT_750_P_Thiobacillus_65_1100, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12238..13605)
DNA (1368bp) protein (456aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BUZ6_NITHN
Macrolide-specific efflux protein MacA {ECO:0000313|EMBL:EYF08494.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
RND family efflux transporter MFP subunit
SCN18_14_9_16_R1_B_scaffold_1424_13
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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13738..14445
DNA (708bp) protein (236aa)
Aquaporin Z n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IFL1_ANADE
aquaporin Z
Aquaporin Z {ECO:0000256|HAMAP-Rule:MF_01146}; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
SCN18_14_9_16_R1_B_scaffold_1424_14
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14596..15003)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036D29CE
Molybdate metabolism regulator {ECO:0000313|EMBL:KHD74856.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
Displaying 14 items

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