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SCN18_14_9_16_R1_B_scaffold_1449

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1449_1
SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, Kapabacteria

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comp(1..1383)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2B6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF08151.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1449_2
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1405..2847)
DNA (1443bp) protein (481aa)
Regulator of chromosome condensation, RCC1 id=3610883 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
chromosome condensation regulator RCC1
Tax=GWB1_Bdellovibrionales_55_8_curated
SCN18_14_9_16_R1_B_scaffold_1449_3
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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comp(2844..4076)
DNA (1233bp) protein (411aa)
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1449_4
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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comp(4073..5305)
DNA (1233bp) protein (411aa)
Glucosyltransferase-I n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GN82_SORC5
glucosyltransferase-I
Tax=RBG_13_Chloroflexi_54_8_curated
SCN18_14_9_16_R1_B_scaffold_1449_5
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

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comp(5302..6507)
DNA (1206bp) protein (402aa)
Extracellular cysteine-rich protein, putative n=1 Tax=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) RepID=B8LZY8_TALSN
Tryptophan synthase alpha chain {ECO:0000313|EMBL:AKF09433.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1449_6
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6645..7382)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5E7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP38143.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1449_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(7379..7993)
DNA (615bp) protein (205aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8V0_SORC5
ECF family RNA polymerase sigma factor
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN99073.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_1449_8
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

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comp(8005..9069)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJA0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM74045.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
SCN18_14_9_16_R1_B_scaffold_1449_9
unknown

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comp(9158..9388)
DNA (231bp) protein (77aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1449_10
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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comp(9488..11341)
DNA (1854bp) protein (618aa)
Pilus retraction protein PilT id=2237701 bin=GWB2_Elusimicrobium_63_22 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
twitching motility protein
Tax=GWB2_Elusimicrobia_63_22_curated
SCN18_14_9_16_R1_B_scaffold_1449_11
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11604..13259
DNA (1656bp) protein (552aa)
amidase n=1 Tax=Streptomyces sp. LaPpAH-108 RepID=UPI0003729590
negative regulator of beta-lactamase expression-like protein
Negative regulator of beta-lactamase expression-like protein {ECO:0000313|EMBL:ACZ86521.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCN18_14_9_16_R1_B_scaffold_1449_12
CN-SCN_Rubrivivax_131x, CN-SCN_Rubrivivax_131x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13320..14654
DNA (1335bp) protein (445aa)
pp2c12; phosphoprotein phosphatase (EC:3.1.3.16)
Phosphoprotein phosphatase {ECO:0000313|EMBL:CAN96653.1}; EC=3.1.3.16 {ECO:0000313|EMBL:CAN96653.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Phosphoprotein phosphatase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GNS3_SORC5
Displaying 12 items

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