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SCN18_14_9_16_R1_B_scaffold_1636

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1636_1
SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..522
DNA (522bp) protein (174aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Peptide deformylase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y754_SORCE
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1636_2
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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626..2959
DNA (2334bp) protein (778aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN97121.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN97121.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GXN7_SORC5
SCN18_14_9_16_R1_B_scaffold_1636_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2928..3275)
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF06889.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
SCN18_14_9_16_R1_B_scaffold_1636_4
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3329..3946
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MG19_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE03614.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
SCN18_14_9_16_R1_B_scaffold_1636_5
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3943..5478
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MG20_CORCM
Putative membrane protein {ECO:0000313|EMBL:KIG15978.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1636_6
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5618..5977
DNA (360bp) protein (120aa)
Glutathione-dependent formaldehyde-activating protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B6D1_9RHIZ
Glutathione-dependent formaldehyde-activating, GFA {ECO:0000313|EMBL:EYF04213.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
glutathione-dependent formaldehyde-activating protein
SCN18_14_9_16_R1_B_scaffold_1636_7
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6193..6693
DNA (501bp) protein (167aa)
Tax=RBG_16_Anaeromyxobacter_69_14_curated
SCN18_14_9_16_R1_B_scaffold_1636_8
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(6820..7353)
DNA (534bp) protein (178aa)
dihydrolipoamide acyltransferase n=1 Tax=Streptomyces sp. FxanaC1 RepID=UPI00036FF5FE
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase {ECO:0000313|EMBL:AIR98001.1}; TaxID=1907 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
SCN18_14_9_16_R1_B_scaffold_1636_9
CN-SCN_Rubrivivax_131x, CN-SCN_Rubrivivax_131x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7611..9047)
DNA (1437bp) protein (479aa)
pyridine nucleotide transhydrogenase n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00035D9650
NAD(P) transhydrogenase beta subunit {ECO:0000313|EMBL:AKF03962.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
NAD(P) transhydrogenase subunit beta
SCN18_14_9_16_R1_B_scaffold_1636_10
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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comp(9044..10636)
DNA (1593bp) protein (531aa)
pntA; NAD(P) transhydrogenase subunit alpha (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46S68_CUPPJ
NAD(P) transhydrogenase alpha subunit {ECO:0000313|EMBL:AKF03963.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
SCN18_14_9_16_R1_B_scaffold_1636_11
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

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10834..11733
DNA (900bp) protein (300aa)
PKD domain containing protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UK57_CELFN
Uncharacterized protein {ECO:0000313|EMBL:KGM08993.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
PKD domain-containing protein
SCN18_14_9_16_R1_B_scaffold_1636_12
unknown

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11885..12532
DNA (648bp) protein (216aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1636_13
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

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comp(12564..13580)
DNA (1017bp) protein (339aa)
DnaJ domain-containing protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CLD5_MYXFH
DnaJ domain-containing protein
DnaJ domain-containing protein {ECO:0000313|EMBL:AEI66459.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
Displaying 13 items

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