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SCN18_14_9_16_R1_B_scaffold_1801

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1801_1
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(3..197)
DNA (195bp) protein (65aa)
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCN18_14_9_16_R1_B_scaffold_1801_2
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

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1148..1894
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVL2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36504.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1801_3
Rhodanobacter spathiphylli_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2620..3735
DNA (1116bp) protein (372aa)
Putative stomatin/prohibitin-family membrane protease subunit protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TRI5_9DELT
Putative stomatin/prohibitin-family membrane protease subunit protein {ECO:0000313|EMBL:ERK87994.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
SPFH domain-containing protein/band 7 family protein
SCN18_14_9_16_R1_B_scaffold_1801_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3809..5002)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R2Q4_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV63551.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_14_9_16_R1_B_scaffold_1801_5
SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial, Actinobacteria, Actinobacteria, Bacteria

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5240..5998
DNA (759bp) protein (253aa)
Short chain dehydrogenase {ECO:0000313|EMBL:EDM76790.1}; EC=1.1.1.- {ECO:0000313|EMBL:EDM76790.1};; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
Short chain dehydrogenase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GBI6_9DELT
short-chain dehydrogenase/reductase SDR
SCN18_14_9_16_R1_B_scaffold_1801_6
unknown

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comp(6140..6910)
DNA (771bp) protein (257aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1801_7
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

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comp(7026..7898)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MRD8_9ACTO
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
ABC transporter
SCN18_14_9_16_R1_B_scaffold_1801_8
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7901..8881)
DNA (981bp) protein (327aa)
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA {ECO:0000313|EMBL:KJE75379.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJE75379.1};; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
Daunorubicin resistance ABC transporter ATPase subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4J2_CONWI
daunorubicin resistance ABC transporter ATPase
SCN18_14_9_16_R1_B_scaffold_1801_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8976..9413
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00037FDBDB
Thioesterase {ECO:0000313|EMBL:KHD76645.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1801_10
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(9520..9939)
DNA (420bp) protein (140aa)
isobutyryl-CoA mutase, chain B (EC:5.4.99.-)
Putative isobutyryl-CoA mutase, chain B {ECO:0000313|EMBL:CAN91813.1}; EC=5.4.99.- {ECO:0000313|EMBL:CAN91813.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Putative isobutyryl-CoA mutase, chain B n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FI18_SORC5
SCN18_14_9_16_R1_B_scaffold_1801_11
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9974..11380)
DNA (1407bp) protein (469aa)
CapA family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08Y80_STIAD
capA family protein
CapA family protein {ECO:0000313|EMBL:ADO67953.1}; Capsule biosynthesis protein CapA {ECO:0000313|EMBL:EAU65444.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
SCN18_14_9_16_R1_B_scaffold_1801_12
unknown

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comp(11561..12463)
DNA (903bp) protein (301aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1801_13
unknown

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comp(12436..13212)
DNA (777bp) protein (259aa)

This feature has no annotations

Displaying 13 items

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