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SCN18_14_9_16_R1_B_scaffold_1861

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1861_1
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

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comp(1..459)
DNA (459bp) protein (153aa)
Putative uncharacterized protein Sb05g002698 (Fragment) n=1 Tax=Sorghum bicolor RepID=C5Y4J0_SORBI
Putative uncharacterized protein Sb05g002698 {ECO:0000313|EMBL:EES09250.1}; Flags: Fragment;; TaxID=4558 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogoneae; Sorghum.;" source="Sorghum bicolor (Sorghum) (Sorghum vulgare).;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1861_2
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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735..1853
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UEE5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW11966.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
putative glucokinase
SCN18_14_9_16_R1_B_scaffold_1861_3
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1895..2626
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GYB7_ACTM4
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_71_12_curated
SCN18_14_9_16_R1_B_scaffold_1861_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2784..4595)
DNA (1812bp) protein (604aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G7K8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF08151.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1861_5
SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, Gemmatimonadetes, Bacteria

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comp(4592..5881)
DNA (1290bp) protein (430aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IGQ1_9CHLR
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:EFO79638.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
chromosome condensation regulator RCC1
SCN18_14_9_16_R1_B_scaffold_1861_6
unknown

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comp(5856..7133)
DNA (1278bp) protein (426aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1861_7
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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comp(7130..8338)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U6A3_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC41974.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
SCN18_14_9_16_R1_B_scaffold_1861_8
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8335..9546)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XMQ9_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF06307.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1861_9
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9543..10304)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FAJ9_SORC5
Uncharacterized protein {ECO:0000313|EMBL:AKF11139.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1861_10
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10301..10960)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJW6_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33447.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1861_11
unknown

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comp(11007..11969)
DNA (963bp) protein (321aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1861_12
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11926..12249)
DNA (324bp) protein (108aa)
UPI0003CFAFC2 related cluster n=1 Tax=unknown RepID=UPI0003CFAFC2
Nucleoside diphosphate kinase regulator {ECO:0000313|EMBL:ESZ19297.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
nucleoside diphosphate kinase regulator
Displaying 12 items

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