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SCN18_14_9_16_R1_B_scaffold_1918

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1918_1
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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1..231
DNA (231bp) protein (77aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G4X2_CHLAD
chromosome condensation regulator RCC1
Tax=RBG_16_Chloroflexi_68_14_curated
SCN18_14_9_16_R1_B_scaffold_1918_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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228..2024
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2B6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF08149.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1918_3
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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comp(2085..3674)
DNA (1590bp) protein (530aa)
protein kinase (EC:2.7.11.1)
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2H5_SORC5
Serine/threonine protein kinase {ECO:0000313|EMBL:EYF08544.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
SCN18_14_9_16_R1_B_scaffold_1918_4
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(3992..5029)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z212_9GAMM
amidohydrolase 2
Tax=CG_Delta_07
SCN18_14_9_16_R1_B_scaffold_1918_5
SCNpilot_BF_INOC_Bacteroidetes_37_82, SCNpilot_BF_INOC_Bacteroidetes_37_82, SCNpilot_BF_INOC_Bacteroidetes_37_82, SCNpilot_BF_INOC_Bacteroidetes_37_82, Bacteroidetes, Bacteria

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comp(5029..6366)
DNA (1338bp) protein (446aa)
Pyridoxal-dependent decarboxylase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SF13_9DELT
sphingosine-1-phosphate lyase 1
Tax=RBG_16_Chloroflexi_64_32_curated
SCN18_14_9_16_R1_B_scaffold_1918_6
SCNpilot_BF_INOC_Clostridium_37_18, SCNpilot_BF_INOC_Clostridium_37_18, Clostridiales, Clostridia, Firmicutes, Bacteria

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6487..7398
DNA (912bp) protein (304aa)
Integral membrane protein DUF6 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLF4_CHLTF
hypothetical protein
Integral membrane protein DUF6 {ECO:0000313|EMBL:AEP13429.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
SCN18_14_9_16_R1_B_scaffold_1918_7
unknown

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comp(7400..8485)
DNA (1086bp) protein (362aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1918_8
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8494..10182)
DNA (1689bp) protein (563aa)
Tax=CG_Delta_07
SCN18_14_9_16_R1_B_scaffold_1918_9
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(10260..11036)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3HGZ2_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:EQM70040.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
transcriptional regulator
SCN18_14_9_16_R1_B_scaffold_1918_10
unknown

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11168..11899
DNA (732bp) protein (244aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1918_11
unknown

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11899..12840
DNA (942bp) protein (314aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1918_12
unknown

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13102..14397
DNA (1296bp) protein (432aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_1918_13
SCN_Clostridium_9x, SCN_Clostridium_9x, Clostridiales, Clostridia, Firmicutes, Bacteria

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14491..15408
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XMX5_SORCE
hypothetical protein
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_1918_14
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15432..15767)
DNA (336bp) protein (112aa)
gph1; phosphoglycolate phosphatase (EC:3.1.3.18)
Putative phosphoglycolate phosphatase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FWW0_SORC5
Hydrolase, haloacid dehalogenase-like family protein {ECO:0000313|EMBL:KFE62054.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
SCN18_14_9_16_R1_B_scaffold_1918_15
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16138..17334
DNA (1197bp) protein (399aa)
Acyl-CoA dehydrogenase, short-chain specific {ECO:0000313|EMBL:AKF05541.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
Acyl-CoA dehydrogenase domain protein id=3729094 bin=GWF2_Lentisphaerae_52_8 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
acyl-CoA dehydrogenase domain-containing protein
SCN18_14_9_16_R1_B_scaffold_1918_16
unknown

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17334..17411
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 16 items

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