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SCN18_14_9_16_R1_B_scaffold_2029

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_2029_1
unknown

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comp(2..400)
DNA (399bp) protein (133aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2029_2
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1002..2114)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQM9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35482.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_2029_3
CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, CN-SCN_Eukaryote_25x, Eukaryote

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comp(2310..3743)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKM0_SORC5
Ribonuclease E {ECO:0000313|EMBL:EYF08860.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2029_4
scnpilot_dereplicated_Phage_unknown_13, scnpilot_dereplicated_Phage_unknown_13, scnpilot_dereplicated_Phage_unknown_13, scnpilot_dereplicated_Phage_unknown_13, scnpilot_dereplicated_Phage_unknown_13, Phage

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3897..4310
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y2T4_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39807.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_2029_5
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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4314..4766
DNA (453bp) protein (151aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BNF8_9FIRM
D-tyrosyl-tRNA(Tyr) deacylase
SCN18_14_9_16_R1_B_scaffold_2029_6
unknown

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4780..5217
DNA (438bp) protein (146aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2029_7
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

comp(5201..6184)
DNA (984bp) protein (328aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y6F2_SORCE
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2029_8
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6317..7009)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKN3_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96614.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_2029_9
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(7151..8656)
DNA (1506bp) protein (502aa)
Protease TldD n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJN0_SORCE
tldD; protease TldD
Protease TldD {ECO:0000313|EMBL:AGP32754.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_2029_10
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

9309..12296
DNA (2988bp) protein (996aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y2T9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39812.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_2029_11
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12344..12970
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Comamonas testosteroni RepID=B7X353_COMTE
Uncharacterized protein {ECO:0000313|EMBL:KGH25777.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2029_12
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13195..13599)
DNA (405bp) protein (135aa)
Single-stranded DNA-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G766_SORC5
ssb; ssDNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_2029_13
CN-SCN_Rhodanobacter_45x, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13759..15705)
DNA (1947bp) protein (649aa)
ABC transporter permease n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQI8_SORCE
ATP-binding protein of ABC transporter {ECO:0000313|EMBL:EYF02157.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
ABC transporter permease
SCN18_14_9_16_R1_B_scaffold_2029_14
scnpilot_dereplicated_Eukaryote_unknown_9, scnpilot_dereplicated_Eukaryote_unknown_9, scnpilot_dereplicated_Eukaryote_unknown_9, scnpilot_dereplicated_Eukaryote_unknown_9, scnpilot_dereplicated_Eukaryote_unknown_9, Eukaryote

Not on your lists

comp(15807..17276)
DNA (1470bp) protein (490aa)
Pyridine nucleotide-disulfide-related oxidoreductase n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11PG6_CYTH3
Pyridine nucleotide-disulfide oxidoreductase-like protein {ECO:0000313|EMBL:GAL84730.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
lpdA; pyridine nucleotide-disulfide oxidoreductase-like protein
SCN18_14_9_16_R1_B_scaffold_2029_15
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17366..17701
DNA (336bp) protein (112aa)
CoA-binding domain protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CS41_SIDLE
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EYF04802.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
CoA-binding domain protein
Displaying 15 items

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