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SCN18_14_9_16_R1_B_scaffold_2035

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_2035_1
SCNpilot_BF_INOC_Clostridium_37_18, SCNpilot_BF_INOC_Clostridium_37_18, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1244)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRE1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35757.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_2035_2
unknown

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comp(1468..2094)
DNA (627bp) protein (209aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2035_3
unknown

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2351..2902
DNA (552bp) protein (184aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2035_4
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3254..4738
DNA (1485bp) protein (495aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
Glycogen synthase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U836_MYXSD
glycogen synthase
SCN18_14_9_16_R1_B_scaffold_2035_5
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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4838..5341
DNA (504bp) protein (168aa)
hypothetical protein id=12556911 bin=CNBR_ACIDO species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP32066.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_2035_6
SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5482..5961)
DNA (480bp) protein (160aa)
Acyl-CoA thioester hydrolase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G833_SORC5
Acyl-CoA thioester hydrolase {ECO:0000313|EMBL:EYF08613.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
acyl-CoA thioester hydrolase
SCN18_14_9_16_R1_B_scaffold_2035_7
Acinetobacter sp. NIPH 809_SCNpilot_P_inoc_Acinetobacter_41_9_partial, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6093..7313
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E9M3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:AKF03128.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2035_8
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7401..7994
DNA (594bp) protein (198aa)
Peptidase, M23/M37 n=1 Tax=Bacillus cereus Rock3-44 RepID=C2W6R6_BACCE
Peptidase, M23/M37 {ECO:0000313|EMBL:EEL51173.1}; TaxID=526986 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus Rock3-44.;"
SCN18_14_9_16_R1_B_scaffold_2035_9
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8062..9420)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides RepID=D7RK21_CORCK
Uncharacterized protein {ECO:0000313|EMBL:ADI59535.1}; TaxID=184914 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (Myxococcus coralloides).;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2035_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9417..10073)
DNA (657bp) protein (219aa)
Transcriptional regulator (TetR/AcrR family) n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GC09_SORC5
TetR/AcrR family transcriptional regulator
Transcriptional regulator (TetR/AcrR family) {ECO:0000313|EMBL:CAN96120.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_2035_11
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10328..11137
DNA (810bp) protein (270aa)
DNA-binding response regulator n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJY8_MYXFH
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:AEI65165.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
SCN18_14_9_16_R1_B_scaffold_2035_12
unknown

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11134..11508
DNA (375bp) protein (125aa)

This feature has no annotations

Displaying 12 items

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