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SCN18_14_9_16_R1_B_scaffold_2267

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_2267_1
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..1089
DNA (1089bp) protein (363aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF05588.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
SCN18_14_9_16_R1_B_scaffold_2267_2
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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1335..2528
DNA (1194bp) protein (398aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:CAN94095.1}; EC=3.2.2.- {ECO:0000313|EMBL:CAN94095.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
A/G-specific adenine glycosylase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EQ53_SORC5
SCN18_14_9_16_R1_B_scaffold_2267_3
SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, Gemmatimonadetes, Bacteria

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2565..3656
DNA (1092bp) protein (364aa)
Response regulator/GGDEF domain protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEF7_SORC5
GGDEF/response regulator receiver domain protein {ECO:0000313|EMBL:EYF04351.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
response regulator/GGDEF domain-containing protein
SCN18_14_9_16_R1_B_scaffold_2267_4
SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27, SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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4638..5195
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUV2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36126.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_2267_5
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5223..6644)
DNA (1422bp) protein (474aa)
Probable outer membrane efflux lipoprotein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSH7_SORC5
outer membrane efflux lipoprotein
Probable outer membrane efflux lipoprotein {ECO:0000313|EMBL:CAN93779.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_2267_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6917..8047)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GSG8_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF01625.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2267_7
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8172..9158)
DNA (987bp) protein (329aa)
No similarity n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G256_SORC5
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
SCN18_14_9_16_R1_B_scaffold_2267_8
SCNPILOT_EXPT_1000_BF_Rhodospirillales_43_39, SCNPILOT_EXPT_1000_BF_Rhodospirillales_43_39, SCNPILOT_EXPT_1000_BF_Rhodospirillales_43_39, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9274..11097)
DNA (1824bp) protein (608aa)
Hsp70 heat shock protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G252_SORC5
Hsp70 heat shock protein
Hsp70 heat shock protein {ECO:0000313|EMBL:CAN92579.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_14_9_16_R1_B_scaffold_2267_9
solids_Saccharomycetales_1, solids_Saccharomycetales_1, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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comp(11343..12800)
DNA (1458bp) protein (486aa)
Putative DnaJ class molecular chaperone n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G249_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF02045.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
DnaJ class molecular chaperone
SCN18_14_9_16_R1_B_scaffold_2267_10
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12844..13758)
DNA (915bp) protein (305aa)
Bacterial lipid A biosynthesis acyltransferase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FNY8_STIAD
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:KFA89555.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
bacterial lipid a biosynthesis acyltransferase
SCN18_14_9_16_R1_B_scaffold_2267_11
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(13814..14383)
DNA (570bp) protein (190aa)
SCN18_14_9_16_R1_B_scaffold_2267_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14380..14985)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XTF9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35646.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_2267_13
unknown

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comp(14982..15182)
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying 13 items

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