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SCN18_14_9_16_R1_B_scaffold_2361

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_2361_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..199)
DNA (198bp) protein (66aa)
Regulatory protein n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NCL9_9ACTO
Regulatory protein {ECO:0000313|EMBL:EGG48796.1}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
XRE family transcriptional regulator
SCN18_14_9_16_R1_B_scaffold_2361_2
Deinococcus deserti, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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287..1276
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1CZ63_DEIDV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO45101.1}; TaxID=546414 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923).;"
SCN18_14_9_16_R1_B_scaffold_2361_3
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1443..2078
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Bacillus thuringiensis MC28 RepID=K0FZR7_BACTU
hypothetical protein
Collagen triple helix repeat protein {ECO:0000313|EMBL:ACY17924.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
SCN18_14_9_16_R1_B_scaffold_2361_4
unknown

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comp(2289..3305)
DNA (1017bp) protein (339aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2361_5
unknown

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comp(4116..4463)
DNA (348bp) protein (116aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2361_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4564..4857)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y1C0_SORCE
Integrase {ECO:0000313|EMBL:KFA87749.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2361_7
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5408..5851)
DNA (444bp) protein (148aa)
PilT protein domain protein n=1 Tax=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) RepID=B9MMI8_CALBD
PilT protein domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCN18_14_9_16_R1_B_scaffold_2361_8
unknown

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comp(5842..6048)
DNA (207bp) protein (69aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2361_9
unknown

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comp(6032..6265)
DNA (234bp) protein (78aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2361_10
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6276..7031)
DNA (756bp) protein (252aa)
Transposase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67KV6_SYMTH
transposase
Transposase {ECO:0000313|EMBL:BAD41264.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
SCN18_14_9_16_R1_B_scaffold_2361_11
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7143..7961)
DNA (819bp) protein (273aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Paenibacillus terrae (strain HPL-003) RepID=G7W3L5_PAETH
Putative oxidoreductase {ECO:0000313|EMBL:AKF04616.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
short-chain dehydrogenase/reductase SDR
SCN18_14_9_16_R1_B_scaffold_2361_12
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8202..8444
DNA (243bp) protein (81aa)
Transcriptional regulator, HxlR family n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P0P2_9DELT
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EPX56656.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
transcriptional regulatory protein
SCN18_14_9_16_R1_B_scaffold_2361_13
unknown

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comp(8668..9366)
DNA (699bp) protein (233aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2361_14
unknown

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10084..10701
DNA (618bp) protein (206aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2361_15
unknown

Not on your lists

comp(10990..11445)
DNA (456bp) protein (152aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2361_16
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11696..12322)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD131 RepID=R8LHT0_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EOP21472.1}; TaxID=1053232 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD131.;"
Collagen-like protein
SCN18_14_9_16_R1_B_scaffold_2361_17
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12701..13750
DNA (1050bp) protein (350aa)
Putative AraC-family transcriptional regulator n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VVJ6_9ACTO
Putative transcriptional regulator {ECO:0000313|EMBL:AKF06778.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
putative AraC-family transcriptional regulator
Displaying 17 items

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