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SCN18_14_9_16_R1_B_scaffold_2851

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_2851_1
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(2..862)
DNA (861bp) protein (287aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4ULW6_ANASK
Cholesterol oxidase {ECO:0000313|EMBL:GAO02324.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
glucose-methanol-choline oxidoreductase
SCN18_14_9_16_R1_B_scaffold_2851_2
unknown

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comp(859..981)
DNA (123bp) protein (41aa)

This feature has no annotations

SCN18_14_9_16_R1_B_scaffold_2851_3
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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1052..1954
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y571_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39375.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_14_9_16_R1_B_scaffold_2851_4
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1958..2731)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QUU3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:AKF09994.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2851_5
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2998..4086
DNA (1089bp) protein (363aa)
Homospermidine synthase (Spermidine-specific) {ECO:0000313|EMBL:ABC82866.1}; EC=2.5.1.45 {ECO:0000313|EMBL:ABC82866.1};; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Homospermidine synthase (Spermidine-specific) n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IE58_ANADE
deoxyhypusine synthase
SCN18_14_9_16_R1_B_scaffold_2851_6
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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4099..5475
DNA (1377bp) protein (459aa)
Putative oxidoreductase {ECO:0000313|EMBL:AKF05993.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
FAD linked oxidase domain-containing protein id=12556252 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
FAD linked oxidase domain-containing protein
SCN18_14_9_16_R1_B_scaffold_2851_7
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

5472..6212
DNA (741bp) protein (247aa)
short chain dehydrogenase id=12556251 bin=CNBR_ACIDO species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Short chain dehydrogenase {ECO:0000313|EMBL:EDM79030.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
fabG; Dehydrogenase
SCN18_14_9_16_R1_B_scaffold_2851_8
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

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6241..6996
DNA (756bp) protein (252aa)
Oxidoreductase, short-chain dehydrogenase/reductase family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZV0_9DELT
Oxidoreductase, short-chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EDM80906.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
short-chain dehydrogenase/reductase family oxidoreductase
SCN18_14_9_16_R1_B_scaffold_2851_9
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7185..7772
DNA (588bp) protein (196aa)
TetR family transcriptional regulator n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LLC9_9ACTO
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:AKF09993.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
TetR family transcriptional regulator
SCN18_14_9_16_R1_B_scaffold_2851_trna_1
unknown

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7859..7932
DNA (74bp)
transferRNA Arg
SCN18_14_9_16_R1_B_scaffold_2851_10
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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7967..8845
DNA (879bp) protein (293aa)
Displaying 11 items

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