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SCN18_14_9_16_R1_B_scaffold_1061

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1061_1
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

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1..675
DNA (675bp) protein (225aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
acnA; aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase 1 id=2528981 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
SCN18_14_9_16_R1_B_scaffold_1061_2
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(856..1755)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI00037D85C3
LysR family transcriptional regulator
Tax=BJP_IG2103_Dechloromonas_60_92
SCN18_14_9_16_R1_B_scaffold_1061_3
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

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1867..2238
DNA (372bp) protein (124aa)
Putative sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTG4_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:EXI66269.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
putative sigma 54 modulation protein/30S ribosomal protein S30EA
SCN18_14_9_16_R1_B_scaffold_1061_4
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

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2268..2951
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNZ4_ACCPU
Modulator of FtsH protease YccA {ECO:0000313|EMBL:EXI87126.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1061_5
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

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2986..3864
DNA (879bp) protein (293aa)
Protease HtpX homolog n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACX1_9PROT
HtpX domain-containing protein
Tax=CG_Beta_01
SCN18_14_9_16_R1_B_scaffold_1061_6
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

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3888..4763
DNA (876bp) protein (292aa)
UspA domain-containing protein id=12497790 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
uspA; universal stress protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
SCN18_14_9_16_R1_B_scaffold_1061_7
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4784..5236)
DNA (453bp) protein (151aa)
Putative signal transduction protein with CBS domains n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RM35_ACCPU
Putative signal-transduction protein {ECO:0000313|EMBL:KFB71895.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
putative signal transduction protein with CBS domains
SCN18_14_9_16_R1_B_scaffold_1061_8
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5529..8483)
DNA (2955bp) protein (985aa)
Uncharacterized protein n=1 Tax=Acinetobacter venetianus RAG-1 = CIP 110063 RepID=N8YK01_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENV37117.1}; TaxID=1191460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. (strain ATCC 31012).;"
transposase, TnpA family
SCN18_14_9_16_R1_B_scaffold_1061_9
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8579..11695)
DNA (3117bp) protein (1039aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003814170
heavy metal efflux pump, cobalt-zinc-cadmium
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGG89163.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_14_9_16_R1_B_scaffold_1061_10
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11692..12732)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036D4873
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89162.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_14_9_16_R1_B_scaffold_1061_11
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12729..14138)
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036F296B
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG89161.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_14_9_16_R1_B_scaffold_1061_12
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14296..15690)
DNA (1395bp) protein (465aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037F7CA9
heavy metal sensor signal transduction histidine kinase
SCN18_14_9_16_R1_B_scaffold_1061_13
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15695..16447)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037FA685
Transcriptional activator protein czcR {ECO:0000313|EMBL:CDQ12289.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
two component heavy metal response winged helix family transcriptional regulator
SCN18_14_9_16_R1_B_scaffold_1061_14
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16404..17540)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FD6C4
Integrase {ECO:0000313|EMBL:KHD33340.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
Phage integrase
SCN18_14_9_16_R1_B_scaffold_1061_15
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17726..18754
DNA (1029bp) protein (343aa)
Plasmid replication region DNA-binding protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IBC5_9BURK
Plasmid replication region DNA-binding protein {ECO:0000313|EMBL:EIF28027.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
cointegrase resolution protein
SCN18_14_9_16_R1_B_scaffold_1061_16
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18787..19344)
DNA (558bp) protein (186aa)
Transposase family protein n=1 Tax=Escherichia coli EPECa12 RepID=I6FJ34_ECOLX
tnpA; transposon Tn21 transposase TnpA
TnpA transposase {ECO:0000313|EMBL:AFN35017.1}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
Displaying 16 items

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