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SCN18_14_9_16_R1_B_scaffold_1228

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1228_1
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..159)
DNA (159bp) protein (53aa)
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) RepID=A4SVB1_POLSQ
Tax=GWA2_Polynucleobacter_45_21_curated
SCN18_14_9_16_R1_B_scaffold_1228_2
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(615..1976)
DNA (1362bp) protein (454aa)
Uncharacterized protein conserved in bacteria (DUF2325) n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFI0_AZOSU
hypothetical protein
Uncharacterized protein conserved in bacteria (DUF2325) {ECO:0000313|EMBL:AEV26046.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCN18_14_9_16_R1_B_scaffold_1228_3
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2001..2336)
DNA (336bp) protein (112aa)
SCN18_14_9_16_R1_B_scaffold_1228_4
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2333..2587)
DNA (255bp) protein (85aa)
SCN18_14_9_16_R1_B_scaffold_1228_5
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3412..4215)
DNA (804bp) protein (268aa)
ABC-type Co2+ transport system, periplasmic component n=1 Tax=Acidovorax sp. CF316 RepID=J1EE79_9BURK
ABC-type Co2+ transport system, periplasmic component {ECO:0000313|EMBL:EJE50539.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
nickel transport complex transmembrane protein NikM
SCN18_14_9_16_R1_B_scaffold_1228_6
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4244..4768)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034A60BB
Uncharacterized protein {ECO:0000313|EMBL:EHP41735.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
putative exported protein
SCN18_14_9_16_R1_B_scaffold_1228_7
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4789..5445)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFI6_AZOSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV26052.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCN18_14_9_16_R1_B_scaffold_1228_8
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5476..7719)
DNA (2244bp) protein (748aa)
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein id=12497108 bin=THIO_MID species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
TonB-dependent receptor {ECO:0000313|EMBL:ENO88624.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
TonB-dependent receptor
SCN18_14_9_16_R1_B_scaffold_1228_9
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8444..10540
DNA (2097bp) protein (699aa)
Hemin receptor, TonB-dependent outer membrane uptake protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFR2_THIDA
hemin receptor , TonB-dependent outer membrane uptake protein
Hemin receptor, TonB-dependent outer membrane uptake protein {ECO:0000313|EMBL:AAZ98544.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCN18_14_9_16_R1_B_scaffold_1228_10
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10623..11669
DNA (1047bp) protein (349aa)
ABC transporter substrate-binding protein n=1 Tax=Thauera terpenica 58Eu RepID=T0ATP9_9RHOO
NnrS family protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
SCN18_14_9_16_R1_B_scaffold_1228_11
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11666..12457
DNA (792bp) protein (264aa)
Putative ABC transporter, permease protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5W9_AROAE
ABC transporter permease
Putative ABC transporter, permease protein {ECO:0000313|EMBL:CAI07292.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SCN18_14_9_16_R1_B_scaffold_1228_12
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12447..13301
DNA (855bp) protein (285aa)
ATPase component ABC-type transport system n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5X0_AROAE
ATPase component ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
SCN18_14_9_16_R1_B_scaffold_1228_13
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13295..14557
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5X1_AROAE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
SCN18_14_9_16_R1_B_scaffold_1228_14
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14598..15497)
DNA (900bp) protein (300aa)
LysR family transcriptional regulator n=1 Tax=Pseudomonas fuscovaginae RepID=UPI000317BB0F
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCN18_14_9_16_R1_B_scaffold_1228_15
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15707..16819
DNA (1113bp) protein (371aa)
Outer membrane protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIE4_AZOSU
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AEV25304.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Displaying 15 items

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