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SCN18_14_9_16_R1_B_scaffold_3163

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_3163_1
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..528)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RRS1_9RHOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI72480.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
SCN18_14_9_16_R1_B_scaffold_3163_2
Enterobacter cloacae_SCNPILOT_CONT_500_P_Enterobacter_55_6.1, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(525..1532)
DNA (1008bp) protein (336aa)
Monosaccharide ABC-transporter transmembrane protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RQ13_9RHOB
monosaccharide ABC-transporter transmembrane protein
Monosaccharide ABC-transporter transmembrane protein {ECO:0000313|EMBL:AGI72481.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
SCN18_14_9_16_R1_B_scaffold_3163_3
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1554..3122)
DNA (1569bp) protein (523aa)
Monosaccharide ABC-transporter ATP-binding protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RJZ7_9RHOB
monosaccharide ABC-transporter ATP-binding protein
Monosaccharide ABC-transporter ATP-binding protein {ECO:0000313|EMBL:AGI72482.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
SCN18_14_9_16_R1_B_scaffold_3163_4
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3122..4093)
DNA (972bp) protein (324aa)
Ribose-binding protein of ribose ABC transporter n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4U114_YERKR
rbsB; D-ribose-binding protein
D-ribose-binding protein {ECO:0000313|EMBL:AHM75234.1}; TaxID=1443113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia enterocolitica LC20.;"
SCN18_14_9_16_R1_B_scaffold_3163_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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4379..5194
DNA (816bp) protein (272aa)
Short-chain dehydrogenase/reductase n=1 Tax=Octadecabacter arcticus 238 RepID=M9RIU5_9RHOB
short-chain dehydrogenase/reductase
Short-chain dehydrogenase/reductase {ECO:0000313|EMBL:AGI72484.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
SCN18_14_9_16_R1_B_scaffold_3163_6
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5231..6094
DNA (864bp) protein (288aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
3-mercaptopyruvate sulfurtransferase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XZG5_PARAH
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCN18_14_9_16_R1_B_scaffold_3163_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6752..7798
DNA (1047bp) protein (349aa)
Fatty acid desaturase Des {ECO:0000313|EMBL:EYR82639.1}; EC=1.14.19.- {ECO:0000313|EMBL:EYR82639.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Fatty acid desaturase (EC:1.14.99.-)
Fatty acid desaturase Des n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYR5_9RHIZ
SCN18_14_9_16_R1_B_scaffold_3163_8
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7870..8109
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2QZU5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUB95004.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
Hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3163_9
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8441..8668
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q3J0_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDI11836.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
SCN18_14_9_16_R1_B_scaffold_3163_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8938..9291
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FAF88F
Strain MEJ076 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ03424.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
response regulator receiver protein
Displaying 10 items

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