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SCN18_14_9_16_R1_B_scaffold_3552

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_3552_1
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..259
DNA (258bp) protein (86aa)
Flagellar L-ring protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXN9_VARPS
flagellar L-ring protein
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCN18_14_9_16_R1_B_scaffold_3552_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(337..1458)
DNA (1122bp) protein (374aa)
Ribulokinase 1 {ECO:0000313|EMBL:EYR80920.1}; EC=2.7.1.16 {ECO:0000313|EMBL:EYR80920.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
FGGY-family pentulose kinase (EC:2.7.1.16)
Ribulokinase 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRA5_9RHIZ
SCN18_14_9_16_R1_B_scaffold_3552_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1458..2150)
DNA (693bp) protein (231aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ENM7_9RHIZ
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:EYR80919.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
SCN18_14_9_16_R1_B_scaffold_3552_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2228..3712)
DNA (1485bp) protein (495aa)
Mannitol 2-dehydrogenase MtlK {ECO:0000313|EMBL:EYR80918.1}; EC=1.1.1.67 {ECO:0000313|EMBL:EYR80918.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Mannitol 2-dehydrogenase MtlK n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C622_9RHIZ
mannitol dehydrogenase
SCN18_14_9_16_R1_B_scaffold_3552_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3774..4547)
DNA (774bp) protein (258aa)
Sorbitol dehydrogenase PolS {ECO:0000313|EMBL:EYR80917.1}; EC=1.1.1.14 {ECO:0000313|EMBL:EYR80917.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Sorbitol dehydrogenase PolS n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLU9_9RHIZ
smoS; sorbitol dehydrogenase
SCN18_14_9_16_R1_B_scaffold_3552_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4544..5545)
DNA (1002bp) protein (334aa)
ATP-binding transport protein SmoK n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVX2_9RHIZ
ATP-binding transport protein SmoK {ECO:0000313|EMBL:EYR80916.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC sorbitol/mannitol transporter, ATPase subunit
SCN18_14_9_16_R1_B_scaffold_3552_7
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5573..6397)
DNA (825bp) protein (275aa)
ABC transporter, membrane spanning protein (Sorbitol/mannitol) n=1 Tax=Rhizobium sp. RepID=L0NHI4_RHISP
ABC transporter, membrane spanning protein (Sorbitol/mannitol) {ECO:0000313|EMBL:CCF20573.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
Putative sorbitol/mannitol ABC transporter, permease protein
SCN18_14_9_16_R1_B_scaffold_3552_8
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6409..7281)
DNA (873bp) protein (291aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CH26_9RHIZ
ABC-type sugar transport system permease component {ECO:0000313|EMBL:EYR80914.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative ABC transporter, permease protein
Displaying 8 items

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