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SCN18_14_9_16_R1_B_scaffold_3588

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_3588_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..917)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ97_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83351.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3588_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1126..2415)
DNA (1290bp) protein (430aa)
MFS transporter n=1 Tax=Rhizobium giardinii RepID=UPI00036863B3
tRNA/rRNA cytosine-C5-methylase {ECO:0000313|EMBL:EYR83350.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
sun; tRNA and rRNA cytosine-C5-methylase (RNA methyltransferase) protein
SCN18_14_9_16_R1_B_scaffold_3588_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2494..2856)
DNA (363bp) protein (121aa)
RlpA-like protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CI48_9RHIZ
RlpA-like protein {ECO:0000313|EMBL:EYR83349.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Rare lipoprotein A
SCN18_14_9_16_R1_B_scaffold_3588_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3218..4096)
DNA (879bp) protein (293aa)
Putative NAD-dependent epimerase/dehydratase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ELH9_9RHIZ
Putative NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EYR83348.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
NAD-dependent epimerase/dehydratase
SCN18_14_9_16_R1_B_scaffold_3588_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4093..5235)
DNA (1143bp) protein (381aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Epoxyqueuosine reductase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CP00_9RHIZ
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3588_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5246..5938)
DNA (693bp) protein (231aa)
Putative glutathione S-transferase Gst {ECO:0000313|EMBL:EYR83346.1}; EC=2.5.1.18 {ECO:0000313|EMBL:EYR83346.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Putative glutathione S-transferase Gst n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTT8_9RHIZ
gst4; glutathione S-transferase family protein
SCN18_14_9_16_R1_B_scaffold_3588_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6126..6932
DNA (807bp) protein (269aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Undecaprenyl-diphosphatase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTL2_9RHIZ
undecaprenyl-diphosphatase
SCN18_14_9_16_R1_B_scaffold_3588_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6970..7119)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY72_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83344.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3588_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7392..8372)
DNA (981bp) protein (327aa)
Putative nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EYR83343.1}; EC=1.6.99.3 {ECO:0000313|EMBL:EYR83343.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative nucleoside-diphosphate-sugar epimerase (EC:1.6.99.3)
Putative nucleoside-diphosphate-sugar epimerase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EYC1_9RHIZ
SCN18_14_9_16_R1_B_scaffold_3588_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8492..8779)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D223_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83342.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_3588_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8937..9677)
DNA (741bp) protein (247aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D6K2_9RHIZ
pyrF; orotidine 5'-phosphate decarboxylase
SCN18_14_9_16_R1_B_scaffold_3588_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9638..9850)
DNA (213bp) protein (71aa)
Fructose-2,6-bisphosphatase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXR7_9RHIZ
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:EYR83340.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative conserved protein
Displaying 12 items

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