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SCN18_14_9_16_R1_B_scaffold_3620

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_3620_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..231)
DNA (231bp) protein (77aa)
High-affinity branched-chain amino acid transport system permease protein BraE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CC45_9RHIZ
ABC-type branched-chain amino acid transport system permease component {ECO:0000313|EMBL:EYR80878.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative transmembrane component of ABC transporter
SCN18_14_9_16_R1_B_scaffold_3620_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(235..1137)
DNA (903bp) protein (301aa)
ABC-type transporter, integral membrane subunit n=8 Tax=Rhizobium meliloti RepID=F6BNS0_SINMB
Branched-chain amino acid ABC-type transport system permease component {ECO:0000313|EMBL:EYR77679.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative transmembrane component of ABC transporter
SCN18_14_9_16_R1_B_scaffold_3620_3
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1426..1980)
DNA (555bp) protein (185aa)
Sarcosine oxidase gamma subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3P2_9RHIZ
Sarcosine oxidase gamma subunit {ECO:0000313|EMBL:EYR80875.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
soxG2; sarcosine oxidase, gamma subunit
SCN18_14_9_16_R1_B_scaffold_3620_4
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1991..4948)
DNA (2958bp) protein (986aa)
Sarcosine oxidase subunit alpha {ECO:0000313|EMBL:EYR80874.1}; EC=1.5.3.1 {ECO:0000313|EMBL:EYR80874.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Sarcosine oxidase subunit alpha n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EZL9_9RHIZ
soxA2; sarcosine oxidase, alpha subunit
SCN18_14_9_16_R1_B_scaffold_3620_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4945..5220)
DNA (276bp) protein (92aa)
Sarcosine oxidase subunit delta {ECO:0000313|EMBL:EYR80873.1}; EC=1.5.3.1 {ECO:0000313|EMBL:EYR80873.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Sarcosine oxidase subunit delta n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJ83_9RHIZ
soxD2; sarcosine oxidase, delta subunit
SCN18_14_9_16_R1_B_scaffold_3620_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5229..6479)
DNA (1251bp) protein (417aa)
Sarcosine oxidase subunit beta {ECO:0000313|EMBL:EYR80872.1}; EC=1.5.3.1 {ECO:0000313|EMBL:EYR80872.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Sarcosine oxidase subunit beta n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZA8_9RHIZ
soxB2; sarcosine oxidase, beta subunit
SCN18_14_9_16_R1_B_scaffold_3620_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6634..7290
DNA (657bp) protein (219aa)
3'(2'),5'-bisphosphate nucleotidase CysQ {ECO:0000313|EMBL:EYR80870.1}; EC=3.1.3.7 {ECO:0000313|EMBL:EYR80870.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
3'(2'),5'-bisphosphate nucleotidase CysQ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3N7_9RHIZ
inositol monophosphatase
Displaying 7 items

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