ggKbase home page

SCN18_14_9_16_R1_B_scaffold_3971

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_3971_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..64)
DNA (63bp) protein (21aa)
SCN18_14_9_16_R1_B_scaffold_3971_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(198..407)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X6V6_RHIFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL51612.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCN18_14_9_16_R1_B_scaffold_3971_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(488..1780)
DNA (1293bp) protein (431aa)
putative sugar isomerase R00627 (EC:5.3.1.-)
L-rhamnose isomerase n=1 Tax=Pseudomonas stutzeri RepID=Q75WH8_PSEST
L-rhamnose isomerase {ECO:0000313|EMBL:BAD14073.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
SCN18_14_9_16_R1_B_scaffold_3971_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1805..3901)
DNA (2097bp) protein (699aa)
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase {ECO:0000313|EMBL:EUB97691.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EUB97691.1};; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase n=1 Tax=Rhizobium sp. CF080 RepID=J2KFF7_9RHIZ
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase
SCN18_14_9_16_R1_B_scaffold_3971_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4103..4915
DNA (813bp) protein (271aa)
Transcriptional regulator, DeoR family n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZV9_9RHIZ
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EHS53981.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
transcriptional regulator DeoR family
SCN18_14_9_16_R1_B_scaffold_3971_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4965..5960
DNA (996bp) protein (332aa)
Rhamnose ABC transporter, periplasmic rhamnose-binding protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X4X2_OCHA4
rhaS; rhamnose ABC transporter, rhamnose-binding protein
Rhamnose ABC transporter, periplasmic rhamnose-binding protein {ECO:0000313|EMBL:ABS16276.1}; Flags: Precursor;; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCN18_14_9_16_R1_B_scaffold_3971_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6181..6777
DNA (597bp) protein (199aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
ABC transporter nucleotide binding/ATPase protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K2Y9_AGRVS
ABC transporter ATPase
Displaying 7 items

View Taxonomy