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SCN18_14_9_16_R1_B_scaffold_4652

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_4652_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..771
DNA (771bp) protein (257aa)
Aminomethyltransferase GcvT {ECO:0000313|EMBL:EYR82120.1}; EC=2.1.2.10 {ECO:0000313|EMBL:EYR82120.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Sarcosine dehydrogenase (EC:1.5.99.1)
Aminomethyltransferase GcvT n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D397_9RHIZ
SCN18_14_9_16_R1_B_scaffold_4652_2
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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768..1613
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D7Q9_9RHIZ
PEP phosphonomutase {ECO:0000313|EMBL:EYR82119.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_4652_3
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1606..3144
DNA (1539bp) protein (513aa)
Trimethylamine methyltransferase MttB {ECO:0000313|EMBL:EYR82118.1}; EC=2.1.1.250 {ECO:0000313|EMBL:EYR82118.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Trimethylamine methyltransferase MttB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYX8_9RHIZ
mttb3; trimethylamine methyltransferase family protein
SCN18_14_9_16_R1_B_scaffold_4652_4
SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, Actinobacteria, Actinobacteria, Bacteria

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comp(3141..3584)
DNA (444bp) protein (148aa)
Putative transcriptional regulator, AsnC/Lrp family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CIV5_9RHIZ
Putative transcriptional regulator, AsnC/Lrp family {ECO:0000313|EMBL:EYR82117.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative transcriptional regulator, AsnC/Lrp family
SCN18_14_9_16_R1_B_scaffold_4652_5
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3695..4255
DNA (561bp) protein (187aa)
Isochorismatase family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EZ99_9RHIZ
Isochorismatase family protein {ECO:0000313|EMBL:EYR82116.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
isochorismatase family protein
SCN18_14_9_16_R1_B_scaffold_4652_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4252..4767)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3A2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR82115.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_4652_7
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4827..5936)
DNA (1110bp) protein (370aa)
Periplasmic binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D7R4_9RHIZ
ABC-type Fe3+-hydroxamate transport system periplasmic component {ECO:0000313|EMBL:EYR82114.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
Displaying 7 items

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