ggKbase home page

SCN18_14_9_16_R1_B_scaffold_4711

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_4711_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1481
DNA (1479bp) protein (493aa)
Probable potassium transport system protein kup n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYN0_9RHIZ
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
kup1; potassium transport system protein kup 1
SCN18_14_9_16_R1_B_scaffold_4711_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1720..2916
DNA (1197bp) protein (399aa)
Cell wall hydrolase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D7E7_9RHIZ
Cell wall hydrolase {ECO:0000313|EMBL:EYR83431.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cell wall hydrolase SleB
SCN18_14_9_16_R1_B_scaffold_4711_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3196..3591
DNA (396bp) protein (132aa)
ATP synthase subunit I n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2Z1_9RHIZ
ATP synthase subunit I {ECO:0000313|EMBL:EYR83430.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ATP synthase protein I
SCN18_14_9_16_R1_B_scaffold_4711_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3653..4405
DNA (753bp) protein (251aa)
F0F1-type ATP synthase, subunit a (EC:3.6.3.14)
F0F1 ATP synthase subunit A n=1 Tax=Rhizobium meliloti RepID=UPI000382CABE
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCN18_14_9_16_R1_B_scaffold_4711_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4472..4699
DNA (228bp) protein (76aa)
atpE; ATP synthase subunit C (EC:3.6.3.14)
ATP synthase subunit C, membrane-bound, F0 sector DCCD-binding n=1 Tax=Rhizobium sp. RepID=L0NBL2_RHISP
ATP synthase F0 subcomplex C subunit {ECO:0000313|EMBL:EYR83428.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCN18_14_9_16_R1_B_scaffold_4711_6
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4788..5423
DNA (636bp) protein (212aa)
ATP synthase subunit b n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLQ9_9RHIZ
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ATP synthase F0F1 subunit B'
SCN18_14_9_16_R1_B_scaffold_4711_7
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5435..5872
DNA (438bp) protein (146aa)
ATP synthase subunit b n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGW2_9RHIZ
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ATP synthase subunit b
Displaying 7 items

View Taxonomy