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SCN18_14_9_16_R1_B_scaffold_4918

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_4918_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..144)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ER71_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR77365.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_4918_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(158..784)
DNA (627bp) protein (209aa)
Transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTM8_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EYR77364.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_4918_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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912..1988
DNA (1077bp) protein (359aa)
Spermidine/putrescine-binding periplasmic protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY87_9RHIZ
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:EYR77363.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative PotD, Spermidine/putrescine-binding periplasmic protein PotD
SCN18_14_9_16_R1_B_scaffold_4918_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2282..3145
DNA (864bp) protein (288aa)
Putrescine transport system permease protein PotH n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGQ1_9RHIZ
ABC-type spermidine/putrescine transport system permease component I {ECO:0000313|EMBL:EYR79366.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
potH; putrescine ABC transport system permease protein PotH
SCN18_14_9_16_R1_B_scaffold_4918_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3148..3936
DNA (789bp) protein (263aa)
Spermidine/putrescine transport system permease protein PotC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEK0_9RHIZ
ABC-type spermidine/putrescine transport system permease component II {ECO:0000313|EMBL:EYR79365.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
potC; spermidine/putrescine transport system permease protein
SCN18_14_9_16_R1_B_scaffold_4918_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3933..5018
DNA (1086bp) protein (362aa)
potG; putrescine transport system ATP-binding protein (EC:3.6.3.31)
spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037C5FEC
ABC-type spermidine/putrescine transport systemATPase component {ECO:0000313|EMBL:EYR79364.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCN18_14_9_16_R1_B_scaffold_4918_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5024..5662
DNA (639bp) protein (213aa)
Beta-lactamase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGR2_9RHIZ
Zn-dependent hydrolase {ECO:0000313|EMBL:EYR79363.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
Displaying 7 items

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