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SCN18_14_9_16_R1_B_scaffold_4995

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_4995_1
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(224..2563)
DNA (2340bp) protein (780aa)
cation:proton antiporter n=1 Tax=Rhizobium giardinii RepID=UPI000378507A
Na(+)/H(+) antiporter subunit A {ECO:0000313|EMBL:EYR83072.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Na+/H+ antiporter
SCN18_14_9_16_R1_B_scaffold_4995_2
SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, Actinobacteria, Actinobacteria, Bacteria

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comp(2611..3006)
DNA (396bp) protein (132aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
Ribonuclease VapC n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GR86_9GAMM
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_4995_3
SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, Actinobacteria, Actinobacteria, Bacteria

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comp(3003..3254)
DNA (252bp) protein (84aa)
Rv0623 family protein transcription factor id=4555503 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
antitoxin
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
SCN18_14_9_16_R1_B_scaffold_4995_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3372..3779
DNA (408bp) protein (136aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
msrB-1; methionine sulfoxide reductase MsrB 1 (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D615_9RHIZ
SCN18_14_9_16_R1_B_scaffold_4995_5
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3883..4386)
DNA (504bp) protein (168aa)
GCN5-like N-acetyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX47_9RHIZ
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:EYR83076.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Phosphinothricin acetyltransferase
SCN18_14_9_16_R1_B_scaffold_4995_6
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4490..5146)
DNA (657bp) protein (219aa)
DNA-binding protein n=1 Tax=Rhizobium giardinii RepID=UPI00035FC044
Putative membrane protein, hemolysin III {ECO:0000313|EMBL:EYR83078.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hemolysin III
SCN18_14_9_16_R1_B_scaffold_4995_7
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5269..5580)
DNA (312bp) protein (104aa)
DnaK suppressor protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EP63_9RHIZ
DnaK suppressor protein {ECO:0000313|EMBL:EYR83079.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
molecuar chaperone DnaK
Displaying 7 items

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