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SCN18_14_9_16_R1_B_scaffold_1323

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1323_1
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..193)
DNA (192bp) protein (64aa)
Nickel-transporting ATPase., Sulfate-transporting ATPase {ECO:0000313|EMBL:CDX42636.1}; EC=3.6.3.24 {ECO:0000313|EMBL:CDX42636.1};; EC=3.6.3.25 {ECO:0000313|EMBL:CDX42636.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
UPI0003CDDFF6 related cluster n=1 Tax=unknown RepID=UPI0003CDDFF6
peptide ABC transporter ATP-binding protein
SCN18_14_9_16_R1_B_scaffold_1323_2
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(183..1076)
DNA (894bp) protein (298aa)
UPI0003D01B6E related cluster n=1 Tax=unknown RepID=UPI0003D01B6E
Peptide ABC transporter, permease protein {ECO:0000313|EMBL:CDX42633.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
binding-protein-dependent transporters inner membrane component
SCN18_14_9_16_R1_B_scaffold_1323_3
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1085..2071)
DNA (987bp) protein (329aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Sinorhizobium meliloti (strain AK83) RepID=F6EDL0_SINMK
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:CDX42630.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
ABC transporter integral membrane protein
SCN18_14_9_16_R1_B_scaffold_1323_4
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2153..3742)
DNA (1590bp) protein (530aa)
UPI0003CFDBD5 related cluster n=1 Tax=unknown RepID=UPI0003CFDBD5
ABC peptide transporter, periplasmic binding protein {ECO:0000313|EMBL:CDX42628.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
extracellular solute-binding protein
SCN18_14_9_16_R1_B_scaffold_1323_5
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4023..4670
DNA (648bp) protein (216aa)
Transcriptional regulator n=1 Tax=Rhodobacter sphaeroides WS8N RepID=F3U2N9_RHOSH
transcriptional regulator, TetR family
Transcriptional regulator {ECO:0000313|EMBL:ACM03556.1}; TaxID=557760 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain KD131 / KCTC 12085).;"
SCN18_14_9_16_R1_B_scaffold_1323_6
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4762..6162
DNA (1401bp) protein (467aa)
Aminotransferase {ECO:0000313|EMBL:CDX42642.1}; EC=2.6.1.- {ECO:0000313|EMBL:CDX42642.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
Aminotransferase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PPL1_RHOS1
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1323_7
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6231..8297
DNA (2067bp) protein (689aa)
UPI0003CDDDB0 related cluster n=1 Tax=unknown RepID=UPI0003CDDDB0
N-methylproline demethylase {ECO:0000313|EMBL:ESY76574.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
NADH:flavin oxidoreductase/NADH oxidase
SCN18_14_9_16_R1_B_scaffold_1323_8
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8297..9850
DNA (1554bp) protein (518aa)
Glycerol-3-phosphate dehydrogenase GlpD {ECO:0000313|EMBL:EYR82675.1}; EC=1.1.5.3 {ECO:0000313|EMBL:EYR82675.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
FAD dependent oxidoreductase n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0PI52_RHIML
FAD dependent oxidoreductase
SCN18_14_9_16_R1_B_scaffold_1323_9
scnpilot_dereplicated_Plasmid_Devosia_2, scnpilot_dereplicated_Plasmid_Devosia_2, scnpilot_dereplicated_Plasmid_Devosia_2, scnpilot_dereplicated_Plasmid_Devosia_2, scnpilot_dereplicated_Plasmid_Devosia_2, Plasmid-like

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9841..10800
DNA (960bp) protein (320aa)
Ornithine cyclodeaminase/mu-crystallin n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I2M3_9RHIZ
Ornithine cyclodeaminase {ECO:0000313|EMBL:KFG70557.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
ornithine cyclodeaminase/mu-crystallin
SCN18_14_9_16_R1_B_scaffold_1323_10
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10823..12253
DNA (1431bp) protein (477aa)
Aldehyde dehydrogenase SH0913 n=3 Tax=Ochrobactrum RepID=C4WM00_9RHIZ
Aldehyde dehydrogenase {ECO:0000313|EMBL:ERI13345.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
aldehyde dehydrogenase
SCN18_14_9_16_R1_B_scaffold_1323_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12269..13189)
DNA (921bp) protein (307aa)
LysR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI000370C08B
LysR family transcriptional regulator {ECO:0000313|EMBL:EHK55471.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator
SCN18_14_9_16_R1_B_scaffold_1323_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13322..14083
DNA (762bp) protein (254aa)
Amino acid ABC transporter, ATP-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKA0_9RHIZ
amino acid transporter
Amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHK58820.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCN18_14_9_16_R1_B_scaffold_1323_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14108..14884
DNA (777bp) protein (259aa)
amino acid ABC transporter n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036328C5
Bacterial extracellular solute-binding protein, family 3 {ECO:0000313|EMBL:EEE44237.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
periplasmic binding ABC transporter protein
SCN18_14_9_16_R1_B_scaffold_1323_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14951..15670
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E9B14E
Histidine/lysine/arginine/ornithine transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDX26670.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
polar amino acid ABC transporter inner membrane subunit
SCN18_14_9_16_R1_B_scaffold_1323_15
unknown

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15663..15767
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 15 items

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