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SCN18_14_9_16_R1_B_scaffold_1915

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_1915_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..356
DNA (354bp) protein (118aa)
Bacteriophage-like protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F1T1_9RHIZ
Bacteriophage-like protein {ECO:0000313|EMBL:EHS53426.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1915_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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357..1397
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Rhizobium phage RR1-A RepID=R9TRN2_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGN34382.1}; TaxID=929833 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Rhizobium phage RR1-A.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1915_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1518..1901
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JWN8_AGRVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM36666.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCN18_14_9_16_R1_B_scaffold_1915_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1901..4069
DNA (2169bp) protein (723aa)
Uncharacterized protein n=1 Tax=Rhizobium phage RR1-A RepID=R9TP54_9CAUD
Tail tape measure protein {ECO:0000313|EMBL:AID18329.1}; TaxID=1498228 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Rhizobium phage vB_RleM_PPF1.;"
Phage tail tape measure protein
SCN18_14_9_16_R1_B_scaffold_1915_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4133..4615)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003691728
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY47037.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
SCN18_14_9_16_R1_B_scaffold_1915_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4590..4817)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037D27F0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY47036.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
SCN18_14_9_16_R1_B_scaffold_1915_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5072..5389)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Photobacterium sp. AK15 RepID=L8JEL9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ELR65862.1}; TaxID=1056511 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium sp. AK15.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_1915_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5376..5690)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JAH1_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJK79602.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCN18_14_9_16_R1_B_scaffold_1915_9
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5915..6469)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003672C4F
DNA-binding protein {ECO:0000313|EMBL:KFI27737.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
Arc-like DNA binding protein domain protein
SCN18_14_9_16_R1_B_scaffold_1915_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6812..7420
DNA (609bp) protein (203aa)
SCN18_14_9_16_R1_B_scaffold_1915_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7417..7896
DNA (480bp) protein (160aa)
SCN18_14_9_16_R1_B_scaffold_1915_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8078..9223
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000374CA1A
Phage integrase family protein {ECO:0000313|EMBL:CDN94817.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
integrase family protein
SCN18_14_9_16_R1_B_scaffold_1915_trna_1
unknown

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comp(9285..9356)
DNA (72bp)
transferRNA Val
SCN18_14_9_16_R1_B_scaffold_1915_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9452..9814)
DNA (363bp) protein (121aa)
Response regulator receiver protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2A1_9RHIZ
Response regulator receiver protein {ECO:0000313|EMBL:EYR80504.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
response regulator CheY-like domain-containing protein
SCN18_14_9_16_R1_B_scaffold_1915_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10005..10889
DNA (885bp) protein (295aa)
N-formylglutamate amidohydrolase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EYH8_9RHIZ
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:EYR80503.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
N-formylglutamate amidohydrolase
SCN18_14_9_16_R1_B_scaffold_1915_15
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10997..11170
DNA (174bp) protein (58aa)
SCN18_14_9_16_R1_B_scaffold_1915_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11160..11933
DNA (774bp) protein (258aa)
Histidinol-phosphatase HisN {ECO:0000313|EMBL:EYR80502.1}; EC=3.1.3.15 {ECO:0000313|EMBL:EYR80502.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Histidinol-phosphatase HisN n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTJ2_9RHIZ
putative inositol mono-phosphatase family protein
SCN18_14_9_16_R1_B_scaffold_1915_17
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11939..12010)
DNA (72bp) protein (24aa)
Displaying 18 items

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