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SCN18_14_9_16_R1_B_scaffold_2241

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R1_B_scaffold_2241_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..97
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CHR0_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJC83122.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2241_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(87..1100)
DNA (1014bp) protein (338aa)
Putative deacylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CS55_9RHIZ
Putative deacylase {ECO:0000313|EMBL:EYR78463.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
deacylase
SCN18_14_9_16_R1_B_scaffold_2241_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1132..1476)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D161_9RHIZ
Putative translation initiation inhibitor, YjgF family {ECO:0000313|EMBL:EYR78464.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
endoribonuclease L-PSP family protein
SCN18_14_9_16_R1_B_scaffold_2241_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1515..2825)
DNA (1311bp) protein (437aa)
amino acid deaminase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003719BD5
Putative amino acid aldolase or racemase {ECO:0000313|EMBL:EJC71488.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
hypothetical protein
SCN18_14_9_16_R1_B_scaffold_2241_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2818..3753)
DNA (936bp) protein (312aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETX6_9RHIZ
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:EYR78466.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hydrolase
SCN18_14_9_16_R1_B_scaffold_2241_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3750..4691)
DNA (942bp) protein (314aa)
ABC transporter permease n=1 Tax=Rhizobium leguminosarum RepID=UPI00037E3AE1
ABC transporter permease
Sugar ABC transporter permease protein {ECO:0000313|EMBL:AJD44440.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
SCN18_14_9_16_R1_B_scaffold_2241_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4688..5653)
DNA (966bp) protein (322aa)
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CS52_9RHIZ
Ribose/xylose/arabinose/galactoside ABC-type transport system permease component {ECO:0000313|EMBL:EYR78468.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC transporter permease
SCN18_14_9_16_R1_B_scaffold_2241_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5650..7158)
DNA (1509bp) protein (503aa)
Ribose import ATP-binding protein RbsA 1 {ECO:0000313|EMBL:EYR78469.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EYR78469.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Ribose import ATP-binding protein RbsA 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D158_9RHIZ
ABC transporter ATP-binding protein
SCN18_14_9_16_R1_B_scaffold_2241_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7178..8248)
DNA (1071bp) protein (357aa)
Sugar ABC transporter, substrate-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWK3_9RHIZ
Sugar ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EYR78470.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC transporter substrate-binding protein
SCN18_14_9_16_R1_B_scaffold_2241_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8472..9257
DNA (786bp) protein (262aa)
IclR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETX3_9RHIZ
IclR family transcriptional regulator {ECO:0000313|EMBL:EYR78471.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
IclR family transcriptional regulator protein
SCN18_14_9_16_R1_B_scaffold_2241_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9263..10477)
DNA (1215bp) protein (405aa)
Flavoprotein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CC79_9RHIZ
Flavoprotein {ECO:0000313|EMBL:EYR78472.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
NAD(FAD)-utilizing dehydrogenase
SCN18_14_9_16_R1_B_scaffold_2241_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10547..10633
DNA (87bp) protein (29aa)
Displaying 12 items

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