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SCN18_14_9_16_R2_B_scaffold_342

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Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R2_B_scaffold_342_1
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..535)
DNA (534bp) protein (178aa)
Anthranilate synthase subunit I {ECO:0000313|EMBL:ERI13952.1}; EC=4.1.3.27 {ECO:0000313|EMBL:ERI13952.1};; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
Anthranilate synthase subunit I n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YPG6_9RHIZ
trpE; anthranilate synthase
SCN18_14_9_16_R2_B_scaffold_342_2
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1161..1622
DNA (462bp) protein (154aa)
AsnC family transcriptional regulator n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KFI0_9RHIZ
AsnC family transcriptional regulator {ECO:0000313|EMBL:EMG53965.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
AsnC family transcriptional regulator
SCN18_14_9_16_R2_B_scaffold_342_3
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1704..2102
DNA (399bp) protein (133aa)
MarR family transcriptional regulator n=3 Tax=Ochrobactrum intermedium RepID=C4WFJ1_9RHIZ
MarR family transcriptional regulator {ECO:0000313|EMBL:EEQ96288.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
marR family protein
SCN18_14_9_16_R2_B_scaffold_342_4
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2145..3437
DNA (1293bp) protein (431aa)
Major facilitator transporter n=2 Tax=Ochrobactrum intermedium RepID=C4WFJ2_9RHIZ
Major facilitator transporter {ECO:0000313|EMBL:EEQ96289.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
transporter, putative
SCN18_14_9_16_R2_B_scaffold_342_5
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3394..4341)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WZA5_OCHA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS14309.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCN18_14_9_16_R2_B_scaffold_342_6
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4449..5315)
DNA (867bp) protein (289aa)
LysR family transcriptional regulator n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XHC2_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:ERI13958.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
bacterial regulatory helix-turn-helix , lysR family protein
SCN18_14_9_16_R2_B_scaffold_342_7
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5331..6302)
DNA (972bp) protein (324aa)
Methyltransferase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1WZF6_9RHIZ
Methyltransferase {ECO:0000313|EMBL:ERI13959.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
mitochondrial small ribosomal subunit Rsm22 family protein
SCN18_14_9_16_R2_B_scaffold_342_8
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6553..7521
DNA (969bp) protein (323aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WZA1_OCHA4
glycine betaine ABC transporter substrate-binding protein
Glycine/betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:EXL08328.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
SCN18_14_9_16_R2_B_scaffold_342_9
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7587..8423
DNA (837bp) protein (279aa)
glycine/betaine ABC transporter permease n=1 Tax=Ochrobactrum anthropi RepID=UPI00028A23AA
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABS14304.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCN18_14_9_16_R2_B_scaffold_342_10
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8456..9502
DNA (1047bp) protein (349aa)
Choline ABC transporter, ATP-binding protein n=3 Tax=Ochrobactrum intermedium RepID=C4WFJ9_9RHIZ
Choline ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEQ96296.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
ABC transporter-like protein
SCN18_14_9_16_R2_B_scaffold_342_11
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9664..10512)
DNA (849bp) protein (283aa)
Glutathione import ATP-binding protein gsiA n=4 Tax=Ochrobactrum RepID=C4WFK0_9RHIZ
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ERM03015.1}; TaxID=1337887 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium 229E.;"
ABC transporter-like protein
SCN18_14_9_16_R2_B_scaffold_342_12
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10509..11384)
DNA (876bp) protein (292aa)
ABC transporter related n=3 Tax=Ochrobactrum RepID=C4WFK1_9RHIZ
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ERI13965.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
ABC transporter-like protein
SCN18_14_9_16_R2_B_scaffold_342_13
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11389..12303)
DNA (915bp) protein (305aa)
Dipeptide transport system permease protein dppC n=2 Tax=Ochrobactrum intermedium RepID=C4WFK2_9RHIZ
Dipeptide transport system permease protein dppC {ECO:0000313|EMBL:EEQ96299.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
binding-protein-dependent transport system inner membrane protein
SCN18_14_9_16_R2_B_scaffold_342_14
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12311..13318)
DNA (1008bp) protein (336aa)
Alkaline phosphatase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WZ95_OCHA4
alkaline phosphatase
Peptide ABC transporter permease {ECO:0000313|EMBL:EXL08334.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
SCN18_14_9_16_R2_B_scaffold_342_15
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13377..14972)
DNA (1596bp) protein (532aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A2ACE2
extracellular solute-binding protein
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:EXL08335.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
SCN18_14_9_16_R2_B_scaffold_342_16
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15309..16058
DNA (750bp) protein (250aa)
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KFJ6_9RHIZ
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:EXL08336.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
pyridoxamine 5'-phosphate oxidase family protein
SCN18_14_9_16_R2_B_scaffold_342_17
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16214..16567
DNA (354bp) protein (118aa)
Transcriptional regulator, ArsR family n=97 Tax=Brucella RepID=A5VRV9_BRUO2
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACU48564.1}; TaxID=568815 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella microti (strain CCM 4915).;"
SCN18_14_9_16_R2_B_scaffold_342_18
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16598..17428
DNA (831bp) protein (277aa)
tRNA/rRNA methyltransferase (SpoU) n=143 Tax=Brucella RepID=A9M6Z9_BRUC2
23S ribosomal RNA methyltransferase
Uncharacterized protein {ECO:0000313|EMBL:ENR21965.1}; TaxID=1160233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella suis 92/29.;"
SCN18_14_9_16_R2_B_scaffold_342_19
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17444..18640)
DNA (1197bp) protein (399aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=MNMA_OCHA4
mnmA; tRNA-specific 2-thiouridylase MnmA
SCN18_14_9_16_R2_B_scaffold_342_20
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18968..19243
DNA (276bp) protein (92aa)
Uncharacterized protein n=255 Tax=Brucellaceae RepID=F2GRG6_BRUM5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAL51608.1}; TaxID=224914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094).;"
SCN18_14_9_16_R2_B_scaffold_342_21
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19388..19684
DNA (297bp) protein (99aa)
Acetyltransferase (EC:2.3.1.-)
Uncharacterized protein n=10 Tax=Brucella abortus RepID=N7AT57_BRUAO
Uncharacterized protein {ECO:0000313|EMBL:EEH14238.1}; TaxID=595497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella ceti str. Cudo.;"
SCN18_14_9_16_R2_B_scaffold_342_22
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19706..20659)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Ochrobactrum anthropi RepID=UPI000288A112
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS14289.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCN18_14_9_16_R2_B_scaffold_342_23
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20725..21321)
DNA (597bp) protein (199aa)
Uncharacterized protein n=253 Tax=Brucella RepID=F2GRG8_BRUM5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ60518.1}; TaxID=520455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella abortus bv. 9 str. C68.;"
SCN18_14_9_16_R2_B_scaffold_342_24
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21668..22297
DNA (630bp) protein (210aa)
Uncharacterized protein n=5 Tax=Ochrobactrum RepID=A6WZ83_OCHA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ96310.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
SCN18_14_9_16_R2_B_scaffold_342_25
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22406..23104)
DNA (699bp) protein (233aa)
Cell cycle response regulator CtrA n=259 Tax=Brucella RepID=CTRA_BRUA1
ctrA; response regulator
Transcriptional regulatory protein {ECO:0000313|EMBL:EEW86349.1}; TaxID=224914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094).;"
SCN18_14_9_16_R2_B_scaffold_342_26
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23634..24026
DNA (393bp) protein (131aa)
Uncharacterized protein n=244 Tax=Brucella RepID=F2GRH2_BRUM5
putative flagellar export protein FliJ
Uncharacterized protein {ECO:0000313|EMBL:ACO01352.1}; TaxID=546272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella melitensis biotype 2 (strain ATCC 23457).;"
SCN18_14_9_16_R2_B_scaffold_342_27
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24117..25241)
DNA (1125bp) protein (375aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=2 Tax=Brucella RepID=D1CWP9_9RHIZ
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:EEZ33490.1}; TaxID=520449 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. 83/13.;"
aminotransferase class I and II family protein
SCN18_14_9_16_R2_B_scaffold_342_28
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25408..26370)
DNA (963bp) protein (321aa)
Oxidoreductase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YTF3_9RHIZ
Oxidoreductase {ECO:0000313|EMBL:ERI13986.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
oxidoreductase domain-containing protein
SCN18_14_9_16_R2_B_scaffold_342_trna_1
unknown

Not on your lists

26553..26626
DNA (74bp)
transferRNA Met
SCN18_14_9_16_R2_B_scaffold_342_29
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26937..27749
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037CF289
Glutamine transporter subunit periplasmic binding component of ABC superfamily {ECO:0000313|EMBL:CDX62294.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
glnH; amino acid ABC transporter substrate-binding protein
Displaying items 1-30 of 63 in total

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