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SCN18_14_9_16_R4_B_scaffold_2383

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_2383_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..435)
DNA (435bp) protein (145aa)
translation initiation factor IF-2 n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000379636B
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|SAAS:SAAS00048520}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
translation initiation factor IF-2
SCN18_14_9_16_R4_B_scaffold_2383_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(436..1164)
DNA (729bp) protein (243aa)
transcription terminating nucleic-acid-binding protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6C63D
DNA, contig: SP623 {ECO:0000313|EMBL:GAN13652.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
transcription terminating nucleic-acid-binding protein
SCN18_14_9_16_R4_B_scaffold_2383_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1145..1366)
DNA (222bp) protein (74aa)
Tautomerase {ECO:0000256|RuleBase:RU362032}; EC=5.3.2.- {ECO:0000256|RuleBase:RU362032};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
isomerase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003786FE7
isomerase
SCN18_14_9_16_R4_B_scaffold_2383_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1366..2988)
DNA (1623bp) protein (541aa)
transcription elongation factor NusA n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036C1778
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
transcription elongation factor NusA
SCN18_14_9_16_R4_B_scaffold_2383_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2988..3524)
DNA (537bp) protein (179aa)
ribosome maturation factor RimP n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3A036
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_2383_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4106..5260
DNA (1155bp) protein (385aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
aminomethyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3933C
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_2383_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5364..5633
DNA (270bp) protein (90aa)
glycine cleavage system protein H n=1 Tax=Sphingomonas melonis RepID=UPI000362D22F
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
glycine cleavage system protein H
SCN18_14_9_16_R4_B_scaffold_2383_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5630..6394
DNA (765bp) protein (255aa)
trans-aconitate methyltransferase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024892EF
methyltransferase
Uncharacterized protein {ECO:0000313|EMBL:GAO40769.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
SCN18_14_9_16_R4_B_scaffold_2383_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6394..7659
DNA (1266bp) protein (422aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
glycine dehydrogenase subunit 1 n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036389C7
glycine dehydrogenase
Displaying 9 items

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