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SCN18_14_9_16_R4_B_scaffold_2456

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_2456_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..514
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5F4E9
Uncharacterized protein {ECO:0000313|EMBL:GAL99328.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_2456_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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511..1047
DNA (537bp) protein (179aa)
competence protein n=2 Tax=Sphingomonas melonis RepID=UPI00037BDBC3
Sphingomonas taxi strain 30a NODE_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29945.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
CinA domain-containing protein
SCN18_14_9_16_R4_B_scaffold_2456_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(975..1466)
DNA (492bp) protein (164aa)
cyclase n=1 Tax=Sphingomonas elodea RepID=UPI0002631731
Putative polyketide cyclase {ECO:0000313|EMBL:GAO38514.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
putative oligoketide cyclase
SCN18_14_9_16_R4_B_scaffold_2456_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1453..2370)
DNA (918bp) protein (306aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
lipoyl synthase (EC:2.8.1.8)
radical SAM protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003806402
SCN18_14_9_16_R4_B_scaffold_2456_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2486..3118
DNA (633bp) protein (211aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
carbonate dehydratase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CAB18
carbonate dehydratase
SCN18_14_9_16_R4_B_scaffold_2456_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3165..3935)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037A53BC
polyphosphate kinase
Polyphosphate kinase {ECO:0000313|EMBL:AIT05587.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_2456_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3992..5791)
DNA (1800bp) protein (600aa)
aspartyl-tRNA synthetase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000366AA24
aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AIT05594.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_2456_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5859..7037
DNA (1179bp) protein (393aa)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
ribonuclease D n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003760B41
ribonuclease D
SCN18_14_9_16_R4_B_scaffold_2456_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7034..7321
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S6B8_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH51316.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Displaying 9 items

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