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SCN18_14_9_16_R4_B_scaffold_2718

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_2718_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..636)
DNA (636bp) protein (212aa)
RNA methyltransferase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003719074
RNA methyltransferase
RNA methyltransferase {ECO:0000313|EMBL:AJP73040.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_14_9_16_R4_B_scaffold_2718_2
unknown

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comp(633..785)
DNA (153bp) protein (51aa)

This feature has no annotations

SCN18_14_9_16_R4_B_scaffold_2718_trna_1
unknown

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818..900
DNA (83bp)
transferRNA Tyr
SCN18_14_9_16_R4_B_scaffold_2718_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(929..2065)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00035D4856
Epoxide hydrolase {ECO:0000313|EMBL:KHK89795.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
epoxide hydrolase
SCN18_14_9_16_R4_B_scaffold_2718_trna_2
unknown

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2394..2470
DNA (77bp)
transferRNA Gly
SCN18_14_9_16_R4_B_scaffold_2718_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2535..3812
DNA (1278bp) protein (426aa)
Putative membrane protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZB8_9SPHN
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11973.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
protein-S-isoprenylcysteine methyltransferase
SCN18_14_9_16_R4_B_scaffold_2718_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3885..5258)
DNA (1374bp) protein (458aa)
glutamate--cysteine ligase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037BCEF3
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11972.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
glutamate--cysteine ligase
SCN18_14_9_16_R4_B_scaffold_2718_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5354..6088)
DNA (735bp) protein (245aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
16S rRNA methyltransferase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036C1E91
16S rRNA methyltransferase
SCN18_14_9_16_R4_B_scaffold_2718_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6085..6300)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3B98D
Sphingomonas taxi strain 30a NODE_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29851.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_2718_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6246..6659)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003682436
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ66923.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
Displaying 10 items

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