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SCN18_14_9_16_R4_B_scaffold_1015

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1015_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..492)
DNA (492bp) protein (164aa)
DNA-binding protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003663689
Putative hemolysin {ECO:0000313|EMBL:GAM01099.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1015_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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623..1309
DNA (687bp) protein (229aa)
OmpA/MotB n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000364B8D3
OmpA family protein {ECO:0000313|EMBL:GAM01100.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
membrane protein
SCN18_14_9_16_R4_B_scaffold_1015_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1355..2206)
DNA (852bp) protein (284aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas wittichii RepID=UPI0003184593
LysR family transcriptional regulator {ECO:0000313|EMBL:KKC24956.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
LysR family transcriptional regulator
SCN18_14_9_16_R4_B_scaffold_1015_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2302..3453
DNA (1152bp) protein (384aa)
isovaleryl-CoA dehydrogenase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035EABF0
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:EZP57481.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
isovaleryl-CoA dehydrogenase
SCN18_14_9_16_R4_B_scaffold_1015_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3450..5051
DNA (1602bp) protein (534aa)
methylcrotonoyl-CoA carboxylase (EC:6.4.1.4)
acetyl-CoA carboxylase subunit beta n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDC43
Acetyl-CoA carboxylase subunit beta {ECO:0000313|EMBL:ESZ86193.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
SCN18_14_9_16_R4_B_scaffold_1015_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5063..5539
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDC42
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP71465.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_14_9_16_R4_B_scaffold_1015_7
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5536..7467
DNA (1932bp) protein (644aa)
3-methylcrotonyl-CoA carboxylase subunit alpha n=1 Tax=Sphingomonas elodea RepID=UPI00026303ED
Putative acyl-CoA carboxylase alpha chain {ECO:0000313|EMBL:GAO38336.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
acyl-CoA carboxylase subunit alpha
SCN18_14_9_16_R4_B_scaffold_1015_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7470..7919
DNA (450bp) protein (150aa)
MaoC family dehydratase n=1 Tax=Blastomonas sp. AAP53 RepID=UPI000314D51B
Uncharacterized protein {ECO:0000313|EMBL:GAO53908.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
MaoC domain-containing protein dehydratase
SCN18_14_9_16_R4_B_scaffold_1015_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8005..8454)
DNA (450bp) protein (150aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
CMP deaminase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI00028A2E7A
CMP deaminase
SCN18_14_9_16_R4_B_scaffold_1015_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8599..8892
DNA (294bp) protein (98aa)
UPI0003D5D92A related cluster n=1 Tax=unknown RepID=UPI0003D5D92A
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
50S ribosomal protein L28
SCN18_14_9_16_R4_B_scaffold_1015_11
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9096..10049)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000370B92C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT07284.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1015_12
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10184..10558
DNA (375bp) protein (125aa)
Rickettsia 17 kDa surface antigen family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X0E3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAM00151.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1015_13
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10894..12888
DNA (1995bp) protein (665aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0IE03_9SPHN
SCN18_14_9_16_R4_B_scaffold_1015_14
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13041..15815
DNA (2775bp) protein (925aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037D342B
TonB-dependent receptor
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCN18_14_9_16_R4_B_scaffold_1015_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15946..16038
DNA (93bp) protein (31aa)
translation initiation factor IF-3 n=1 Tax=Sphingomonas melonis RepID=UPI000366AD1F
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
translation initiation factor IF-3
Displaying 15 items

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