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SCN18_14_9_16_R4_B_scaffold_1375

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1375_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..370)
DNA (369bp) protein (123aa)
FAD-dependent oxidoreductase n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9332
FAD dependent oxidoreductase {ECO:0000313|EMBL:KHS46706.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
FAD dependent oxidoreductase
SCN18_14_9_16_R4_B_scaffold_1375_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(516..1688)
DNA (1173bp) protein (391aa)
2Fe-2S ferredoxin n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9331
Rieske (2Fe-2S) protein {ECO:0000313|EMBL:KHS46705.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
Rieske (2Fe-2S) protein
SCN18_14_9_16_R4_B_scaffold_1375_3
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1761..2405
DNA (645bp) protein (215aa)
Transcriptional regulator, TetR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7R2_NOVAD
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABD26111.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCN18_14_9_16_R4_B_scaffold_1375_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2379..3041)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002ED99AF
yjdF; putative membrane protein YjdF
Putative membrane protein YjdF {ECO:0000313|EMBL:BAI96523.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCN18_14_9_16_R4_B_scaffold_1375_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3028..4380)
DNA (1353bp) protein (451aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
phosphoglucosamine mutase n=1 Tax=Sphingomonas melonis RepID=UPI0003717F78
phosphoglucosamine mutase
SCN18_14_9_16_R4_B_scaffold_1375_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4463..5725
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003708CDB
sodium:dicarboxylate symporter
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:AJP70855.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_14_9_16_R4_B_scaffold_1375_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5795..6604
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000288E4B6
Ubiquinone biosynthesis protein {ECO:0000313|EMBL:KHA63223.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1375_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6749..7795
DNA (1047bp) protein (349aa)
DNA repair protein RecF n=1 Tax=Sphingomonas melonis RepID=UPI000360615F
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
recombinase RecF
SCN18_14_9_16_R4_B_scaffold_1375_9
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7812..9086
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B41126
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:KEQ53197.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
major facilitator superfamily protein
SCN18_14_9_16_R4_B_scaffold_1375_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9129..11633
DNA (2505bp) protein (835aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
DNA gyrase subunit B n=1 Tax=Sphingomonas melonis RepID=UPI00036841E7
DNA gyrase subunit B
SCN18_14_9_16_R4_B_scaffold_1375_11
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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11807..12745
DNA (939bp) protein (313aa)
amidohydrolase n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225EB4B
amidohydrolase
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
Displaying 11 items

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