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SCN18_14_9_16_R4_B_scaffold_1423

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1423_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..608
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WSW1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAL99343.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1423_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(820..1206)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9R001_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX62233.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1423_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1206..1607)
DNA (402bp) protein (134aa)
Glutathione-dependent formaldehyde-activating enzyme n=1 Tax=uncultured organism RepID=T1W6E4_9ZZZZ
Glutathione-dependent formaldehyde-activating enzyme {ECO:0000313|EMBL:AGU10074.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1423_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1736..4051
DNA (2316bp) protein (772aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
DNA helicase II n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6B32C
DNA helicase II
SCN18_14_9_16_R4_B_scaffold_1423_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4134..4685
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000374EA04
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT05653.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1423_6
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4813..5055
DNA (243bp) protein (81aa)
PemI-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIH1_9SPHN
PbsX family transcriptional regulator {ECO:0000313|EMBL:EXS68051.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
PemI-like protein
SCN18_14_9_16_R4_B_scaffold_1423_7
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5055..5387
DNA (333bp) protein (111aa)
mRNA interferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIH0_9SPHN
Toxin MazF {ECO:0000313|EMBL:EXS68052.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
PemK-like protein
SCN18_14_9_16_R4_B_scaffold_1423_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5393..5755)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036962C4
DNA, contig: SP614 {ECO:0000313|EMBL:GAN12929.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1423_9
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5797..7899)
DNA (2103bp) protein (701aa)
Prolyl oligopeptidase, N-terminal beta-propeller domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WT29_9SPHN
Putative prolyl endopeptidase {ECO:0000313|EMBL:GAM01699.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
prolyl oligopeptidase
SCN18_14_9_16_R4_B_scaffold_1423_10
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7981..9378
DNA (1398bp) protein (466aa)
MFS transporter n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD0F4
MFS transporter
MFS transporter {ECO:0000313|EMBL:AIT05559.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1423_11
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9495..9782)
DNA (288bp) protein (96aa)
septum formation initiator n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B604A0
Putative septum formation initiator {ECO:0000313|EMBL:GAM01697.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
septum formation initiator
SCN18_14_9_16_R4_B_scaffold_1423_12
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9959..11236)
DNA (1278bp) protein (426aa)
eno; enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
enolase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B614F7
SCN18_14_9_16_R4_B_scaffold_1423_13
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11371..11832
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4A438
Sphingomonas taxi strain 30a NODE_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28751.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1423_14
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11836..12180
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WT34_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT06058.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1423_15
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12177..12320
DNA (144bp) protein (48aa)
Displaying 15 items

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