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SCN18_14_9_16_R4_B_scaffold_658

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_658_1
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1067)
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Gluconacetobacter sp. SXCC-1 RepID=F3SBX4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGG75741.1}; TaxID=1004836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter sp. SXCC-1.;"
major facilitator transporter
SCN18_14_9_16_R4_B_scaffold_658_2
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1332..2165
DNA (834bp) protein (278aa)
Putative oxidoreductase n=1 Tax=Gluconacetobacter sp. SXCC-1 RepID=F3SBV1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AHE54876.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
short-chain dehydrogenase
SCN18_14_9_16_R4_B_scaffold_658_3
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2287..3243)
DNA (957bp) protein (319aa)
ribokinase; K00852 ribokinase [EC:2.7.1.15] id=17169852 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Ribokinase {ECO:0000313|EMBL:CDB57287.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
ribokinase
SCN18_14_9_16_R4_B_scaffold_658_4
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3407..4417
DNA (1011bp) protein (337aa)
Transcriptional regulator, LacI family n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VK15_CAUST
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADG10838.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCN18_14_9_16_R4_B_scaffold_658_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4632..6956
DNA (2325bp) protein (775aa)
Outer membrane receptor protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GT69_9SPHN
Outer membrane receptor protein {ECO:0000313|EMBL:EJL33550.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
TonB-dependent receptor
SCN18_14_9_16_R4_B_scaffold_658_6
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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6971..8224
DNA (1254bp) protein (418aa)
Major facilitator superfamily MFS_1 n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IKQ1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE54871.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
MFS transporter
SCN18_14_9_16_R4_B_scaffold_658_7
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8352..9701)
DNA (1350bp) protein (450aa)
Amidohydrolase, AtzE family n=1 Tax=Novosphingobium sp. AP12 RepID=J2HAT0_9SPHN
Amidohydrolase, AtzE family {ECO:0000313|EMBL:EJL32613.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
amidase
SCN18_14_9_16_R4_B_scaffold_658_8
unknown

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comp(9694..9891)
DNA (198bp) protein (66aa)

This feature has no annotations

SCN18_14_9_16_R4_B_scaffold_658_9
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9976..11376)
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00036E9029
Uncharacterized protein {ECO:0000313|EMBL:KCZ62582.1}; TaxID=1207058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. L-53-1-40.;"
amidohydrolase
SCN18_14_9_16_R4_B_scaffold_658_10
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11373..11759)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00036E2EA2
Uncharacterized protein {ECO:0000313|EMBL:EFC82967.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_658_11
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11746..12237)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A7Z2_9ACTN
hypothetical protein
Tax=RBG_16_Actinobacteria_67_15_curated
SCN18_14_9_16_R4_B_scaffold_658_12
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12452..12928
DNA (477bp) protein (159aa)
Putative monooxygenase component B n=2 Tax=Arthrobacter RepID=A1R1F5_ARTAT
nitrilotriacetate monooxygenase
Nitrilotriacetate monooxygenase {ECO:0000313|EMBL:BAO28370.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
SCN18_14_9_16_R4_B_scaffold_658_13
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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13039..13527
DNA (489bp) protein (163aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RUR6_ASTEC
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADU14116.1}; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 /; CB 48).;"
SCN18_14_9_16_R4_B_scaffold_658_14
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13871..15421)
DNA (1551bp) protein (517aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000363B761
Hydantoinase B {ECO:0000313|EMBL:KJS19124.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
hyuB; putative hydantoinase B
SCN18_14_9_16_R4_B_scaffold_658_15
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15445..17505)
DNA (2061bp) protein (687aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000364FE01
Uncharacterized protein {ECO:0000313|EMBL:KGF67167.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hyuA; putative hydantoinase A
SCN18_14_9_16_R4_B_scaffold_658_16
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17502..18278)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00037E3338
Uncharacterized protein {ECO:0000313|EMBL:KGF67166.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_658_17
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18360..18743)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000378997C
Cupin {ECO:0000313|EMBL:KJS08400.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
cupin
SCN18_14_9_16_R4_B_scaffold_658_18
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18973..19929)
DNA (957bp) protein (319aa)
Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T4I1_CAUSK
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABZ70933.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCN18_14_9_16_R4_B_scaffold_658_19
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19970..20776)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D5T1_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ83921.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
extradiol ring-cleavage dioxygenase class III protein subunit B
SCN18_14_9_16_R4_B_scaffold_658_20
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20778..21965)
DNA (1188bp) protein (396aa)
(2Fe-2S)-binding protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6A501
Rieske (2fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:EJU10204.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
rieske (2fe-2S) iron-sulfur domain protein
SCN18_14_9_16_R4_B_scaffold_658_21
unknown

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comp(21979..22053)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 21 items

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