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SCN18_14_9_16_R5_B_scaffold_1158

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R5_B_scaffold_1158_1
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..171
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035CCC89
Epimerase {ECO:0000313|EMBL:KGD68121.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
NAD-dependent epimerase/dehydratase
SCN18_14_9_16_R5_B_scaffold_1158_2
SCNpilot_BF_INOC_Bacteroidetes_39_46, SCNpilot_BF_INOC_Bacteroidetes_39_46, SCNpilot_BF_INOC_Bacteroidetes_39_46, BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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193..1338
DNA (1146bp) protein (382aa)
FnlC protein involved in UDP-L-FucpNAc biosynthesis (A nucleotide sugar for antigen-O bisynthesis). Probable UDP-2-acetamino-2,6-dideoxy-L-talose 2-epimerase n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XSR6_FLAIG
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KGD68123.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
fnlC; UDP-L-FucpNAc biosynthesis protein FnlC
SCN18_14_9_16_R5_B_scaffold_1158_3
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1317..2534
DNA (1218bp) protein (406aa)
group 1 family glycosyltransferase (EC:2.4.1.-)
Glycosyltransferase, group 1 family {ECO:0000313|EMBL:ADE83275.1}; EC=2.4.1.- {ECO:0000313|EMBL:ADE83275.1};; TaxID=264731 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23).;"
Glycosyltransferase, group 1 family n=1 Tax=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) RepID=D5EVH1_PRER2
SCN18_14_9_16_R5_B_scaffold_1158_4
SCNPILOT_EXPT_1000_BF_Niastella_42_33, SCNPILOT_EXPT_1000_BF_Niastella_42_33, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2560..3675
DNA (1116bp) protein (372aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
GDP-mannose 4,6-dehydratase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GMX3_9SPHI
GDP-mannose 4,6-dehydratase
SCN18_14_9_16_R5_B_scaffold_1158_5
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3713..5014
DNA (1302bp) protein (434aa)
Nucleotide sugar dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8T6_NIAKG
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:KIC95622.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
nucleotide sugar dehydrogenase
SCN18_14_9_16_R5_B_scaffold_1158_6
SCNPILOT_EXPT_1000_BF_Niastella_42_33, SCNPILOT_EXPT_1000_BF_Niastella_42_33, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5044..6018
DNA (975bp) protein (325aa)
epimerase n=1 Tax=Segetibacter koreensis RepID=UPI00036D3810
UDP-glucuronate decarboxylase {ECO:0000313|EMBL:GAO41213.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
epimerase
SCN18_14_9_16_R5_B_scaffold_1158_7
SCNPILOT_EXPT_1000_BF_Niastella_42_33, SCNPILOT_EXPT_1000_BF_Niastella_42_33, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6020..6562
DNA (543bp) protein (181aa)
GDP-L-fucose synthase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QS71_SPILD
GDP-L-fucose synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 7 items

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