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SCN18_25_1_16_R1_B_scaffold_2118

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_2118_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..875)
DNA (873bp) protein (291aa)
peptide ABC transporter permease n=1 Tax=Comamonas sp. B-9 RepID=UPI0003959198
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EJE54340.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
ptpB; peptide ABC transporter permease
SCN18_25_1_16_R1_B_scaffold_2118_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(872..1825)
DNA (954bp) protein (318aa)
peptide ABC transporter n=1 Tax=Comamonas sp. B-9 RepID=UPI000395769C
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EJE54341.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
ptpD; peptide ABC transporter permease
SCN18_25_1_16_R1_B_scaffold_2118_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1845..3422)
DNA (1578bp) protein (526aa)
peptide ABC transporter n=1 Tax=Comamonas sp. B-9 RepID=UPI000395A337
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EJE54342.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
family 5 extracellular solute-binding protein
SCN18_25_1_16_R1_B_scaffold_2118_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3561..3947
DNA (387bp) protein (129aa)
TdcF n=1 Tax=Comamonas sp. B-9 RepID=UPI000395D7AE
Putative translation initiation inhibitor, yjgF family {ECO:0000313|EMBL:EJE54343.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
RidA
SCN18_25_1_16_R1_B_scaffold_2118_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3976..4944
DNA (969bp) protein (323aa)
2-dehydro-3-deoxygalactonokinase n=1 Tax=Comamonas sp. B-9 RepID=UPI0003958029
putative 2-dehydro-3-deoxygalactonokinase
Putative 2-dehydro-3-deoxygalactonokinase {ECO:0000313|EMBL:AGU50896.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCN18_25_1_16_R1_B_scaffold_2118_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4941..5591
DNA (651bp) protein (217aa)
Variovorax paradoxus strain MEDvA23 contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26844.1}; EC=4.1.2.21 {ECO:0000313|EMBL:KIQ26844.1};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Comamonas sp. B-9 RepID=UPI0003959FE0
kdpg and khg aldolase
SCN18_25_1_16_R1_B_scaffold_2118_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5683..5856
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U1XU86_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM22898.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_2118_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5856..6221
DNA (366bp) protein (122aa)
UTP--glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259, ECO:0000313|EMBL:CDM22897.1}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259, ECO:0000313|EMBL:CDM22897.1};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ILM9_BORPD
Displaying 8 items

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