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SCN18_25_1_16_R1_B_scaffold_2190

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_2190_1
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..328)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Dickeya dadantii (strain Ech703) RepID=C6C7F4_DICDC
Uncharacterized protein {ECO:0000313|EMBL:CEJ15258.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_2190_2
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(360..1964)
DNA (1605bp) protein (535aa)
Oligopeptide transporter OPT superfamily protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7TB23_ALCXX
Oligopeptide transporter
Oligopeptide transporter {ECO:0000313|EMBL:AHF79122.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis praecaptivus.;"
SCN18_25_1_16_R1_B_scaffold_2190_3
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2023..2784)
DNA (762bp) protein (254aa)
Transcriptional regulator, IclR family protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7TB24_ALCXX
Transcriptional regulator, IclR family protein {ECO:0000313|EMBL:EGP42465.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
IclR family transcriptional regulator
SCN18_25_1_16_R1_B_scaffold_2190_4
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2899..3003
DNA (105bp) protein (35aa)
SCN18_25_1_16_R1_B_scaffold_2190_5
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3005..3907)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00035F0D65
LysR family transcriptional regulator YbhD
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22058.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
SCN18_25_1_16_R1_B_scaffold_2190_6
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3966..5066
DNA (1101bp) protein (367aa)
3-methylitaconate isomerase {ECO:0000313|EMBL:CKI08736.1}; EC=5.3.3.6 {ECO:0000313|EMBL:CKI08736.1};; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI000362B951
protein of unknown function DUF453
SCN18_25_1_16_R1_B_scaffold_2190_7
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5216..6028
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI00037E0451
ABC-type spermidine/putrescine transport system, ATPase component {ECO:0000313|EMBL:EIE99283.1}; TaxID=928724 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
Putrescine transport ATP-binding protein PotA
Displaying 7 items

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