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SCN18_25_1_16_R1_B_scaffold_1385

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_1385_1
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(38..649)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I0W3_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23161.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1385_2
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(686..1936)
DNA (1251bp) protein (417aa)
D-amino acid dehydrogenase small subunit n=29 Tax=Bordetella RepID=F4LE02_BORPC
FAD dependent oxidoreductase {ECO:0000313|EMBL:KCV61529.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
amino acid dehydrogenase subunit
SCN18_25_1_16_R1_B_scaffold_1385_3
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2239..3693
DNA (1455bp) protein (485aa)
Dihydropyrimidinase {ECO:0000313|EMBL:EGI78510.1}; EC=3.5.2.2 {ECO:0000313|EMBL:EGI78510.1};; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
dihydropyrimidinase (EC:3.5.2.2)
Dihydropyrimidinase n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KNT3_9BURK
SCN18_25_1_16_R1_B_scaffold_1385_4
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3721..4575
DNA (855bp) protein (285aa)
Amino acid ABC transporter solute-binding protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CSQ1_9BURK
Polar amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB62690.1}; TaxID=28092 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia andropogonis.;"
amino acid ABC transporter solute-binding protein
SCN18_25_1_16_R1_B_scaffold_1385_5
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4586..5374
DNA (789bp) protein (263aa)
arginine ABC transporter ATP-binding protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002FF4DFE
ABC polar amino acid transporter, ATPase subunit {ECO:0000313|EMBL:EIJ46645.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
ABC transporter ATP-binding protein
SCN18_25_1_16_R1_B_scaffold_1385_6
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5384..6061
DNA (678bp) protein (226aa)
Amino acid ABC transporter permease n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KNT0_9BURK
Polar amino acid ABC transporter permease {ECO:0000313|EMBL:KKB62768.1}; TaxID=28092 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia andropogonis.;"
putative glutamine ABC transporter permease protein GlnM
SCN18_25_1_16_R1_B_scaffold_1385_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6074..6754
DNA (681bp) protein (227aa)
Amino acid ABC transporter permease n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0EI69_9BURK
Amino acid ABC transporter permease {ECO:0000313|EMBL:EOA05596.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
amino acid ABC transporter permease
SCN18_25_1_16_R1_B_scaffold_1385_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6837..7721)
DNA (885bp) protein (295aa)
LysR family transcriptional regulator n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KNT6_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:KKB64110.1}; TaxID=28092 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia andropogonis.;"
LysR family transcriptional regulator
SCN18_25_1_16_R1_B_scaffold_1385_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7826..8506
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000312053F
Hydantoin racemase {ECO:0000313|EMBL:EJN09548.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
hydantoin racemase
SCN18_25_1_16_R1_B_scaffold_1385_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8532..9473
DNA (942bp) protein (314aa)
carbon-nitrogen hydrolase (EC:3.5.-.-)
Carbon-nitrogen hydrolase family protein {ECO:0000313|EMBL:CAP42673.1}; EC=3.5.-.- {ECO:0000313|EMBL:CAP42673.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
Carbon-nitrogen hydrolase family protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IM70_BORPD
SCN18_25_1_16_R1_B_scaffold_1385_11
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9547..9795)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037EB6D7
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:CDM23162.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Displaying 11 items

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