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SCN18_25_1_16_R1_B_scaffold_1598

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_1598_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..685
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Halomonas sp. PBN3 RepID=U7NN33_9GAMM
DNA double-strand break repair protein Mre11
DNA double-strand break repair protein Mre11 {ECO:0000313|EMBL:CDM25623.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1598_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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682..3339
DNA (2658bp) protein (886aa)
GTP-binding protein n=2 Tax=Thauera RepID=N6YTZ0_9RHOO
DNA double-strand break repair Rad50 ATPase
DNA double-strand break repair Rad50 ATPase {ECO:0000313|EMBL:CDM25622.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1598_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3266..4297)
DNA (1032bp) protein (344aa)
LysR family transcriptional regulator id=12550339 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCN18_25_1_16_R1_B_scaffold_1598_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4412..5026
DNA (615bp) protein (205aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216, ECO:0000313|EMBL:CDM25621.1}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003614D10
FMN-dependent NADH-azoreductase
SCN18_25_1_16_R1_B_scaffold_1598_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5051..5851)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HXV6_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM25620.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1598_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5848..6219)
DNA (372bp) protein (124aa)
DNA-binding protein n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3U7X5_ADVKW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM25619.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1598_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6346..6828)
DNA (483bp) protein (161aa)
UPF0234 protein Bpet3698 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=Y3698_BORPD
hypothetical protein YajQ
UPF0234 protein BN940_15856 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1598_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6907..7227)
DNA (321bp) protein (107aa)
Branched-chain amino acid transport n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UH9_RHOFD
branched-chain amino acid transport
Branched-chain amino acid transport {ECO:0000313|EMBL:CDM25611.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1598_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7220..7912)
DNA (693bp) protein (231aa)
branched-chain amino acid permease n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034DE5C3
Branched-chain amino acid transport protein
Branched-chain amino acid transport protein {ECO:0000313|EMBL:CDM25610.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1598_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7873..8325)
DNA (453bp) protein (151aa)
Putative dioxygenase n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YTZ6_NOCFA
dioxygenase
Putative dioxygenase {ECO:0000313|EMBL:BAD58345.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
Displaying 10 items

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