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SCN18_25_1_16_R1_B_scaffold_1606

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_1606_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..448
DNA (447bp) protein (149aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydro-6-deoxy-D-glucose 3,5-epimerase n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3BBR5_PSEAC
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:KFJ93094.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
SCN18_25_1_16_R1_B_scaffold_1606_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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589..1494
DNA (906bp) protein (302aa)
recombinase RdgC n=1 Tax=Pusillimonas noertemannii RepID=UPI000371A610
DNA recombination-dependent growth factor C
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1606_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1679..2383)
DNA (705bp) protein (235aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhizobium sp. Pop5 RepID=K0W4M0_9RHIZ
putative oxidoreductase, SDR family
Putative oxidoreductase, SDR family {ECO:0000313|EMBL:AHG62443.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
SCN18_25_1_16_R1_B_scaffold_1606_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2488..3375
DNA (888bp) protein (296aa)
Transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0KX53_RHILT
LysR family transcriptional regulator {ECO:0000313|EMBL:KEC79716.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
LysR family transcriptional regulator
SCN18_25_1_16_R1_B_scaffold_1606_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3666..4568
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Serratia odorifera DSM 4582 RepID=D4E390_SEROD
Uncharacterized protein {ECO:0000313|EMBL:EFE95666.1}; TaxID=667129 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia odorifera DSM 4582.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_1606_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4612..5814
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Enterobacter aerogenes EA1509E RepID=L8BIA2_ENTAE
TieB {ECO:0000313|EMBL:KJO39698.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
FIG00639638: hypothetical protein
SCN18_25_1_16_R1_B_scaffold_1606_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5940..7232)
DNA (1293bp) protein (431aa)
Aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000313|EMBL:CDM24346.1}; EC=2.1.3.2 {ECO:0000313|EMBL:CDM24346.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Aspartate carbamoyltransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GUR6_PUSST
SCN18_25_1_16_R1_B_scaffold_1606_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7428..8027)
DNA (600bp) protein (200aa)
Exported protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GUR7_PUSST
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:CDM24345.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1606_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8083..8268)
DNA (186bp) protein (62aa)
Multimodular transpeptidase-transglycosylase (EC:2.4.1.129)
Multimodular transpeptidase-transglycosylase {ECO:0000313|EMBL:CDM24344.1}; EC=2.4.1.129 {ECO:0000313|EMBL:CDM24344.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Displaying 9 items

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