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SCN18_25_1_16_R1_B_scaffold_1866

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_1866_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..174)
DNA (174bp) protein (58aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Protoheme IX farnesyltransferase n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U7U7L0_9BURK
Heme O synthase, protoheme IX farnesyltransferase
SCN18_25_1_16_R1_B_scaffold_1866_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(209..1291)
DNA (1083bp) protein (361aa)
Putative cytochrome oxidase assembly protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GWA0_PUSST
Heme A synthase, cytochrome oxidase biogenesis protein
Heme A synthase, cytochrome oxidase biogenesis protein {ECO:0000313|EMBL:CDM22880.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1866_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1291..1902)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F21C7E
Probable transmembrane protein
Probable transmembrane protein {ECO:0000313|EMBL:CDM22881.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1866_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1899..2678)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002EF48C6
Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion
Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion {ECO:0000313|EMBL:CDM22882.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1866_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2714..2920
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5IUZ1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM22883.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1866_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3044..3919)
DNA (876bp) protein (292aa)
Cytochrome c oxidase polypeptide III (EC:1.9.3.1)
Cytochrome c oxidase polypeptide III {ECO:0000313|EMBL:CDM22884.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CDM22884.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Putative cytochrome c oxidase, subunit III n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GW95_PUSST
SCN18_25_1_16_R1_B_scaffold_1866_7
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3948..4142)
DNA (195bp) protein (65aa)
Membrane protein n=2 Tax=Pandoraea RepID=V5UG76_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM22885.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1866_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4139..4255)
DNA (117bp) protein (39aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM22886.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCN18_25_1_16_R1_B_scaffold_1866_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4267..5877)
DNA (1611bp) protein (537aa)
Cytochrome c oxidase polypeptide I (EC:1.9.3.1)
Cytochrome c oxidase polypeptide I {ECO:0000313|EMBL:CDM22887.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CDM22887.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
cytochrome oxidase subunit I n=1 Tax=Pusillimonas noertemannii RepID=UPI00030B80F9
SCN18_25_1_16_R1_B_scaffold_1866_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5962..7041)
DNA (1080bp) protein (360aa)
Cytochrome c oxidase polypeptide II (EC:1.9.3.1)
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU004024}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU004024, ECO:0000313|EMBL:CDM22888.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Cytochrome c oxidase subunit 2 n=2 Tax=Alcaligenes RepID=M5IUZ3_9BURK
Displaying 10 items

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