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SCN18_25_1_16_R1_B_scaffold_499

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_499_1
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..226)
DNA (225bp) protein (75aa)
tRNA (Guanine37-N1)-methyltransferase (EC:2.1.1.-)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00037A7E10
SCN18_25_1_16_R1_B_scaffold_499_2
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(241..777)
DNA (537bp) protein (179aa)
ribosome maturation factor RimM n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00031C9AED
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
16S rRNA processing protein RimM
SCN18_25_1_16_R1_B_scaffold_499_3
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(914..1180)
DNA (267bp) protein (89aa)
30S ribosomal protein S16 n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DCU1_9BURK
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
rpsP; 30S ribosomal protein S16
SCN18_25_1_16_R1_B_scaffold_499_4
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1216..1998
DNA (783bp) protein (261aa)
SCN18_25_1_16_R1_B_scaffold_499_5
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2009..3109)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIS5_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM95464.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
SCN18_25_1_16_R1_B_scaffold_499_6
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3185..4990)
DNA (1806bp) protein (602aa)
acyl-CoA dehydrogenase oxidoreductase (EC:1.3.99.-)
acyl-CoA dehydrogenase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000310F879
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ESH92584.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
SCN18_25_1_16_R1_B_scaffold_499_7
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5031..5963)
DNA (933bp) protein (311aa)
Electron transfer flavoprotein subunit alpha 2 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T3W7_ALCXX
Electron transfer flavoprotein subunit alpha 2 {ECO:0000313|EMBL:EGP44949.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
Electron transfer flavoprotein, alpha subunit
SCN18_25_1_16_R1_B_scaffold_499_8
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5979..6728)
DNA (750bp) protein (250aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KQ34_9BURK
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:EGI78202.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
electron transfer flavoprotein subunit beta 3
SCN18_25_1_16_R1_B_scaffold_499_9
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6811..7617)
DNA (807bp) protein (269aa)
enoyl-CoA hydratase/carnithine racemase (EC:4.2.1.17)
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:AEI76185.1}; EC=4.2.1.17 {ECO:0000313|EMBL:AEI76185.1};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
enoyl-CoA hydratase n=1 Tax=Cupriavidus sp. WS RepID=UPI0003667F5B
SCN18_25_1_16_R1_B_scaffold_499_10
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7795..8721
DNA (927bp) protein (309aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RXE2_9BURK
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EFV94938.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
moxR; putative methanol dehydrogenase regulatory protein (MoxR) like ATPAse
SCN18_25_1_16_R1_B_scaffold_499_11
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8759..9760
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RXE3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFV94939.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_499_12
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9761..11776
DNA (2016bp) protein (672aa)
Transglutaminase-like protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RXE4_9BURK
Transglutaminase-like protein {ECO:0000313|EMBL:EFV94940.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
transglutaminase
SCN18_25_1_16_R1_B_scaffold_499_13
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11773..12885
DNA (1113bp) protein (371aa)
mltB; putative membrane-bound lytic murein transglycosylase (EC:3.2.1.-)
murein transglycosylase n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002E93581
Murein transglycosylase {ECO:0000313|EMBL:KIF82877.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
SCN18_25_1_16_R1_B_scaffold_499_14
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12960..13841)
DNA (882bp) protein (294aa)
Membrane protein n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U1ZC07_9PSED
sam; S-adenosylmethionine uptake transporter Sam
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
SCN18_25_1_16_R1_B_scaffold_499_15
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13857..14771)
DNA (915bp) protein (305aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
cysM; cysteine synthase B (EC:2.5.1.47)
Cysteine synthase B n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQ88_9BURK
SCN18_25_1_16_R1_B_scaffold_499_16
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14778..15722)
DNA (945bp) protein (315aa)
Oxidative stress-inducible transcription activator n=1 Tax=Ralstonia sp. PBA RepID=I9W4G7_9RALS
Oxidative stress-inducible transcription activator {ECO:0000313|EMBL:EIZ03332.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
LysR family transcriptional regulator
SCN18_25_1_16_R1_B_scaffold_499_17
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15807..16787
DNA (981bp) protein (327aa)
2-dehydro-3-deoxygalactonokinase {ECO:0000313|EMBL:ESR24144.1}; EC=2.7.1.58 {ECO:0000313|EMBL:ESR24144.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
2-dehydro-3-deoxygalactonokinase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RFI2_9RHIZ
2-keto-3-deoxy-galactonokinase
SCN18_25_1_16_R1_B_scaffold_499_18
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16840..18858)
DNA (2019bp) protein (673aa)
ATP-dependent DNA helicase {ECO:0000313|EMBL:CCA84989.1}; EC=3.6.1.- {ECO:0000313|EMBL:CCA84989.1};; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;"
recG; ATP-dependent DNA helicase (EC:3.6.1.-)
ATP-dependent DNA helicase n=1 Tax=Ralstonia syzygii R24 RepID=G3A1A4_9RALS
SCN18_25_1_16_R1_B_scaffold_499_19
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18858..19247)
DNA (390bp) protein (130aa)
endoribonuclease n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002D7778A
endoribonuclease L-PSP
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCN18_25_1_16_R1_B_scaffold_499_20
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19360..19782)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034D4A63
membrane protein
Transmembrane protein {ECO:0000313|EMBL:EZP34833.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
SCN18_25_1_16_R1_B_scaffold_499_21
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19816..24165
DNA (4350bp) protein (1450aa)
SCN18_25_1_16_R1_B_scaffold_499_22
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24290..30181
DNA (5892bp) protein (1964aa)
Excinuclease ABC, A subunit 1 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HIK6_ACHXA
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
uvrA1; excinuclease ABC subunit A
SCN18_25_1_16_R1_B_scaffold_499_23
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30178..30552
DNA (375bp) protein (125aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=mine drainage metagenome RepID=E6PQP6_9ZZZZ
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CBH97251.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
glyoxalase
SCN18_25_1_16_R1_B_scaffold_499_24
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30601..31257)
DNA (657bp) protein (219aa)
Glutathione S-transferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG19_9BURK
glutathione S-transferase
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCN18_25_1_16_R1_B_scaffold_499_25
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31329..31736
DNA (408bp) protein (136aa)
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EIK88797.1}; EC=1.13.11.- {ECO:0000313|EMBL:EIK88797.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHV7_9BURK
lactoylglutathione lyase
SCN18_25_1_16_R1_B_scaffold_499_26
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31794..32174
DNA (381bp) protein (127aa)
demethylmenaquinone methyltransferase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002ECECA2
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:KES21099.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. AAC.;"
Dimethylmenaquinone methyltransferase
Displaying 26 items

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