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SCN18_25_1_16_R1_B_scaffold_533

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_533_1
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..467
DNA (465bp) protein (155aa)
monooxygenase n=1 Tax=Mycobacterium avium RepID=UPI0002E630B7
Monooxygenase {ECO:0000313|EMBL:KKC00103.1}; TaxID=342002 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium terrae complex.;" source="Mycobacterium arupense.;"
monooxygenase
SCN18_25_1_16_R1_B_scaffold_533_2
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

546..1766
DNA (1221bp) protein (407aa)
NnrS family protein n=1 Tax=Thauera sp. 27 RepID=N6YTC2_9RHOO
NnrS family protein {ECO:0000313|EMBL:ENO83239.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
nnrS; putative heme-Cu-containing membrane protein
SCN18_25_1_16_R1_B_scaffold_533_3
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1919..2350)
DNA (432bp) protein (144aa)
SCN18_25_1_16_R1_B_scaffold_533_4
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2417..4705)
DNA (2289bp) protein (763aa)
Candidate cation transport ATPase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5V8_RAMTT
cation transport ATPase
Candidate cation transport ATPase {ECO:0000313|EMBL:AEG93992.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCN18_25_1_16_R1_B_scaffold_533_5
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4775..5194)
DNA (420bp) protein (140aa)
Heat shock protein Hsp20 id=2009793 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
small heat shock protein
Tax=CG_Beta_01
SCN18_25_1_16_R1_B_scaffold_533_6
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5466..6668)
DNA (1203bp) protein (401aa)
beta-ketoadipyl CoA thiolase (EC:2.3.1.9)
Beta-ketoadipyl CoA thiolase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12E60_POLSJ
Beta-ketoadipyl-CoA thiolase {ECO:0000313|EMBL:GAO38720.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
SCN18_25_1_16_R1_B_scaffold_533_7
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6719..7105)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5CAN5_9GAMM
hypothetical protein
Tax=RBG_16_Chloroflexi_54_11_curated
SCN18_25_1_16_R1_B_scaffold_533_8
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7122..8519)
DNA (1398bp) protein (466aa)
Transporter, major facilitator family protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7S031_9BURK
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFV94180.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
ampG; putative transporter AmpG
SCN18_25_1_16_R1_B_scaffold_533_9
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8889..10397
DNA (1509bp) protein (503aa)
Phenylphosphate carboxylase, beta subunit n=2 Tax=Geobacter metallireducens RepID=Q39TU3_GEOMG
Contig_35, whole genome shotgun sequence {ECO:0000313|EMBL:KIX12524.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus sp. SPR.;"
phenylphosphate carboxylase subunit beta
SCN18_25_1_16_R1_B_scaffold_533_10
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10417..11388
DNA (972bp) protein (324aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2J7R7_9BURK
Tricarboxylate transport protein TctC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCN18_25_1_16_R1_B_scaffold_533_11
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11437..12519
DNA (1083bp) protein (361aa)
MarR family transcriptional regulator n=1 Tax=uncultured bacterium RepID=G9FAF7_9BACT
MarR family transcriptional regulator
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCN18_25_1_16_R1_B_scaffold_533_12
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12449..13432)
DNA (984bp) protein (328aa)
Transcriptional regulator, LysR family n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SLN7_METPP
D-malate degradation protein R {ECO:0000313|EMBL:EWS58634.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
LysR family transcriptional regulator
SCN18_25_1_16_R1_B_scaffold_533_13
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13535..15073
DNA (1539bp) protein (513aa)
mmsA1; methylmalonate-semialdehyde dehydrogenase (acylating) 1 (EC:1.2.1.27)
methylmalonate-semialdehyde dehydrogenase n=1 Tax=Burkholderia kururiensis RepID=UPI000349A09F
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KGY28420.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
SCN18_25_1_16_R1_B_scaffold_533_14
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15174..15719)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3W6A1_9RHOB
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SCN18_25_1_16_R1_B_scaffold_533_15
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15722..16699)
DNA (978bp) protein (326aa)
Putative TIM-barrel fold metal-dependent hydrolase id=4547726 bin=GWF2_Methylomirabilis_70_14 species=Pseudomonas sp. GM67 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase family protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
SCN18_25_1_16_R1_B_scaffold_533_16
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16696..17766)
DNA (1071bp) protein (357aa)
Putative nitrilase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CFF3_9PLAN
Putative nitrilase {ECO:0000313|EMBL:EDL56553.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
nitrilase
SCN18_25_1_16_R1_B_scaffold_533_17
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17803..18114)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13J81_BURXL
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
SCN18_25_1_16_R1_B_scaffold_533_18
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18126..18830)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00038082A6
Amino acid ABC transporter ATPase {ECO:0000313|EMBL:KGF68613.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
livF; high-affinity branched-chain amino acid ABC transporter (ATP-binding protein)
SCN18_25_1_16_R1_B_scaffold_533_19
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18817..19554)
DNA (738bp) protein (246aa)
ABC transporter-like protein
ABC transporter ATP-binding protein id=14625344 bin=bin7_NC10_sister species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCN18_25_1_16_R1_B_scaffold_533_20
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19551..20579)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036AB511
putative ABC transporter permease
Putative ABC transporter permiase component {ECO:0000313|EMBL:BAL75022.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_25_1_16_R1_B_scaffold_533_21
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20589..21476)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003613A57
putative Branched-chain amino acid ABC transporter (permease protein); livH-like protein
Putative Branched-chain amino acid ABC transporter (Permease protein) livH-like protein {ECO:0000313|EMBL:CCD01065.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCN18_25_1_16_R1_B_scaffold_533_22
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21495..22781)
DNA (1287bp) protein (429aa)
Putative Leu/Ile/Val-binding protein homolog 8 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AP88_AZOBR
putative Leu/Ile/Val-binding protein homolog 8
Putative Leu/Ile/Val-binding protein homolog 8 {ECO:0000313|EMBL:CCD01061.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCN18_25_1_16_R1_B_scaffold_533_23
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22991..23761
DNA (771bp) protein (257aa)
Putative transcriptional regulator iclR-family n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KBU3_AZOSB
gylR; IclR family transcriptional regulator
Putative transcriptional regulator iclR-family {ECO:0000313|EMBL:CAL96299.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
SCN18_25_1_16_R1_B_scaffold_533_24
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23810..25054)
DNA (1245bp) protein (415aa)
Putative signal transduction protein containing EAL and modified HD-GYP domains n=1 Tax=Burkholderia sp. BT03 RepID=J2HLU4_9BURK
Diguanylate phosphodiesterase metal dependent hydrolase domain containing protein {ECO:0000313|EMBL:EUC13669.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
diguanylate phosphodiesterase
SCN18_25_1_16_R1_B_scaffold_533_25
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25186..26085)
DNA (900bp) protein (300aa)
2-oxoacid:ferredoxin oxidoreductase, beta subunit n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KBT5_9FIRM
2-oxoacid:ferredoxin oxidoreductase, beta subunit
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
SCN18_25_1_16_R1_B_scaffold_533_26
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26091..27251)
DNA (1161bp) protein (387aa)
2-oxoacid:ferredoxin oxidoreductase, alpha subunit n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KG58_9FIRM
2-oxoacid:ferredoxin oxidoreductase, alpha subunit
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
SCN18_25_1_16_R1_B_scaffold_533_27
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27248..28930)
DNA (1683bp) protein (561aa)
NADPH-dependent glutamate synthase beta chain-like oxidoreductase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KLY1_9FIRM
NADPH-dependent glutamate synthase beta chain-like oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCN18_25_1_16_R1_B_scaffold_533_28
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28927..29484)
DNA (558bp) protein (186aa)
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KJF6_9FIRM
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Displaying 28 items

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