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SCN18_25_1_16_R1_B_scaffold_588

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_588_1
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(122..1354)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035D1D67
major facilitator transporter
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
SCN18_25_1_16_R1_B_scaffold_588_2
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1359..1889)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035F19CA
Uncharacterized protein {ECO:0000313|EMBL:KFC71854.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_588_3
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2000..2335
DNA (336bp) protein (112aa)
hypothetical protein id=12553619 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EFV94085.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
cyclopropane-fatty-acyl-phospholipid synthase
SCN18_25_1_16_R1_B_scaffold_588_4
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2332..3831
DNA (1500bp) protein (500aa)
Glycerol-3-phosphate dehydrogenase n=1 Tax=Herbaspirillum sp. CF444 RepID=J3DL97_9BURK
glpD; glycerol-3-phosphate dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
SCN18_25_1_16_R1_B_scaffold_588_5
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3828..4532
DNA (705bp) protein (235aa)
Putative transport ATPase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K7V1_AZOSB
putative transport ATPase
Tax=CG_Rhodocyc_01
SCN18_25_1_16_R1_B_scaffold_588_6
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4592..5440
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002DF6FB8
metal-dependent hydrolase
Tax=CG_Rhodocyc_01
SCN18_25_1_16_R1_B_scaffold_588_7
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5512..6585)
DNA (1074bp) protein (358aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hisC; histidinol-phosphate transaminase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3HZW4_9BRAD
SCN18_25_1_16_R1_B_scaffold_588_8
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6647..8017)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZ50_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45035.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCN18_25_1_16_R1_B_scaffold_588_9
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8137..8478)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSH9_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SCN18_25_1_16_R1_B_scaffold_588_10
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8489..9817)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUS8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ12096.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
uncharacterized NAD(FAD)-dependent dehydrogenase
SCN18_25_1_16_R1_B_scaffold_588_11
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10041..11537
DNA (1497bp) protein (499aa)
Benzamide amidohydrolase {ECO:0000313|EMBL:BAJ23981.1}; EC=3.5.1.4 {ECO:0000313|EMBL:BAJ23981.1};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
amidase (EC:3.5.1.4)
Benzamide amidohydrolase n=1 Tax=uncultured bacterium RepID=E2RWF5_9BACT
SCN18_25_1_16_R1_B_scaffold_588_12
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11576..12880)
DNA (1305bp) protein (435aa)
boxA; benzoyl-CoA oxygenase, component A BoxA (EC:1.14.12.21)
benzoyl-CoA oxygenase n=1 Tax=Acidovorax radicis RepID=UPI0002375FE9
Variovorax paradoxus strain MEDvA23 contig_48, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28467.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
SCN18_25_1_16_R1_B_scaffold_588_13
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12888..14315)
DNA (1428bp) protein (476aa)
Benzoyl-CoA oxygenase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2HGB1_9BURK
Benzoyl-CoA oxygenase {ECO:0000313|EMBL:ESJ04682.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
Benzoyl-CoA oxygenase component B
SCN18_25_1_16_R1_B_scaffold_588_14
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14350..16008)
DNA (1659bp) protein (553aa)
crotonase (EC:4.2.1.17)
Crotonase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QZ37_RALPI
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCN18_25_1_16_R1_B_scaffold_588_15
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16222..17802
DNA (1581bp) protein (527aa)
Aldehyde Dehydrogenase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CW55_VARPS
aldehyde dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ACS16753.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCN18_25_1_16_R1_B_scaffold_588_16
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17924..18166
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y3C5_9RHIZ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCN18_25_1_16_R1_B_scaffold_588_17
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18144..18647
DNA (504bp) protein (168aa)
Putative nucleic-acid-binding protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQ36_9BURK
twitching motility protein PilT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCN18_25_1_16_R1_B_scaffold_588_18
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18768..18974
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QUN8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ETF03367.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_588_19
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18971..19429
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CPI6_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ45090.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
SCN18_25_1_16_R1_B_scaffold_588_20
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19591..20061
DNA (471bp) protein (157aa)
Rhodanese-like domain protein n=1 Tax=Burkholderia sp. KJ006 RepID=I2DZ32_9BURK
Rhodanese-like domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:ABM92989.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
SCN18_25_1_16_R1_B_scaffold_588_21
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20084..21070
DNA (987bp) protein (329aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
cysK; cysteine synthase A CysK (EC:2.5.1.47)
Cysteine synthase A n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTH5_9BURK
SCN18_25_1_16_R1_B_scaffold_588_22
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21248..22261
DNA (1014bp) protein (338aa)
Sulfate/thiosulfate-binding protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRJ7_9BURK
Sulfate/thiosulfate-binding protein {ECO:0000313|EMBL:EHR72256.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
sulfate ABC transporter substrate-binding protein
SCN18_25_1_16_R1_B_scaffold_588_23
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22289..23125
DNA (837bp) protein (279aa)
Sulfate ABC transporter, permease protein CysT n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRJ6_9BURK
Sulfate ABC transporter, permease protein CysT {ECO:0000313|EMBL:EHR72255.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
cysUT; ABC type transporter
SCN18_25_1_16_R1_B_scaffold_588_24
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23122..24069
DNA (948bp) protein (316aa)
Sulfate ABC transporter, permease protein CysW n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRJ5_9BURK
Sulfate ABC transporter, permease protein CysW {ECO:0000313|EMBL:EHR72254.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
sulfate ABC transporter permease
SCN18_25_1_16_R1_B_scaffold_588_25
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24075..25184
DNA (1110bp) protein (370aa)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
cysA; ABC type ATPase (EC:3.6.3.25)
Sulfate ABC transporter, ATP-binding protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRJ4_9BURK
SCN18_25_1_16_R1_B_scaffold_588_26
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(25099..26055)
DNA (957bp) protein (319aa)
Transcriptional regulator n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRJ3_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EHR72252.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
LysR family transcriptional regulator
SCN18_25_1_16_R1_B_scaffold_588_27
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26173..26736)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ55_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC19378.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
Displaying 27 items

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