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SCN18_25_1_16_R1_B_scaffold_743

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_743_1
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..131
DNA (129bp) protein (43aa)
SCN18_25_1_16_R1_B_scaffold_743_2
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1543..1896
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349E856
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_51_14_curated
SCN18_25_1_16_R1_B_scaffold_743_3
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2599..2835
DNA (237bp) protein (79aa)
Protein containing DUF497 n=1 Tax=mine drainage metagenome RepID=T1D386_9ZZZZ
Protein containing DUF497 {ECO:0000313|EMBL:EQD75914.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
protein of unknown function DUF497
SCN18_25_1_16_R1_B_scaffold_743_4
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2819..3073
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T1A8R8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KFB67420.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_743_5
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3169..3522
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349E856
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EGW23498.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_743_6
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3657..4238
DNA (582bp) protein (194aa)
hypothetical protein id=12493358 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCN18_25_1_16_R1_B_scaffold_743_7
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4166..9391)
DNA (5226bp) protein (1742aa)
RecQ familyATP-dependent DNA helicase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUK2_9BURK
RecQ familyATP-dependent DNA helicase
RecQ familyATP-dependent DNA helicase {ECO:0000313|EMBL:AFU46623.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCN18_25_1_16_R1_B_scaffold_743_8
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9720..10142
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE11 RepID=UPI00036FE911
PilT protein domain-containing protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCN18_25_1_16_R1_B_scaffold_743_9
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10214..11380)
DNA (1167bp) protein (389aa)
Putative ABC transporter, branched-chain amino acid-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XI30_VARPD
putative ABC transporter, branched-chain amino acid-binding protein
Putative ABC transporter, branched-chain amino acid-binding protein {ECO:0000313|EMBL:AGU52171.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCN18_25_1_16_R1_B_scaffold_743_10
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11405..13264)
DNA (1860bp) protein (620aa)
AMP-dependent synthetase and ligase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CP76_VARPS
AMP-dependent synthetase and ligase
Variovorax paradoxus strain MEDvA23 contig_69, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25350.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
SCN18_25_1_16_R1_B_scaffold_743_11
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13286..14059)
DNA (774bp) protein (258aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J3CVC9_9BURK
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL78976.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative branched-chain amino acid ABC transporter, ATP-binding protein
SCN18_25_1_16_R1_B_scaffold_743_12
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14056..14853)
DNA (798bp) protein (266aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Acidovorax sp. CF316 RepID=J1E7T5_9BURK
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJE48389.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
ABC transporter-like protein
SCN18_25_1_16_R1_B_scaffold_743_13
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14858..15934)
DNA (1077bp) protein (359aa)
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI000368FDD2
putative branched-chain amino acid ABC transporter, permease protein
Putative branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:AGU52175.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCN18_25_1_16_R1_B_scaffold_743_14
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15950..16825)
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YBS7_9BURK
inner-membrane translocator
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCN18_25_1_16_R1_B_scaffold_743_15
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17081..17887)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HB10_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERS06326.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. PN-3.;"
TetR family transcriptional regulator
SCN18_25_1_16_R1_B_scaffold_743_16
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18022..19395)
DNA (1374bp) protein (458aa)
Putative transcriptional regulator n=1 Tax=Burkholderia sp. YI23 RepID=G8MIG8_9BURK
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AET93376.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
SCN18_25_1_16_R1_B_scaffold_743_17
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19451..20446
DNA (996bp) protein (332aa)
Putative sulfatase n=1 Tax=Variovorax paradoxus B4 RepID=T1XMC6_VARPD
putative sulfatase
Putative sulfatase {ECO:0000313|EMBL:AGU53753.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
Displaying 17 items

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