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SCN18_25_1_16_R1_B_scaffold_1050

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_1050_1
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..554)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000372506B
ClpXP protease specificity-enhancing factor {ECO:0000313|EMBL:EDM85144.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
sspB; ClpXP protease specificity-enhancing factor
SCN18_25_1_16_R1_B_scaffold_1050_2
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(554..1168)
DNA (615bp) protein (205aa)
Glutathione S-transferase, N-terminal domain protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7S0Z6_9BURK
Glutathione S-transferase, N-terminal domain protein {ECO:0000313|EMBL:EFV93652.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
regF; SspA protein
SCN18_25_1_16_R1_B_scaffold_1050_3
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1277..2143)
DNA (867bp) protein (289aa)
petC; cytochrome C1 precursor (EC:1.10.2.2)
Cytochrome C1 family n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7S0Z5_9BURK
Cytochrome C1 family {ECO:0000313|EMBL:EFV93651.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
SCN18_25_1_16_R1_B_scaffold_1050_4
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2156..3541)
DNA (1386bp) protein (462aa)
Cytochrome b n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7S0Z4_9BURK
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
cytochrome B
SCN18_25_1_16_R1_B_scaffold_1050_5
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3588..4190)
DNA (603bp) protein (201aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit PetA (EC:1.10.2.2)
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNY2_9BURK
SCN18_25_1_16_R1_B_scaffold_1050_6
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4563..4997
DNA (435bp) protein (145aa)
Large-conductance mechanosensitive channel n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RST4_ACCPU
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1454005 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-94.;"
large conductance mechanosensitive channel protein
SCN18_25_1_16_R1_B_scaffold_1050_7
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5041..5787)
DNA (747bp) protein (249aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RDS7_9RHOO
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_1050_8
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5828..7012
DNA (1185bp) protein (395aa)
Membrane associated serine endoprotease n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S8B4_9BURK
Outer membrane stress sensor protease DegS
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCN18_25_1_16_R1_B_scaffold_1050_9
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7175..7990)
DNA (816bp) protein (272aa)
Sec-independent protein translocase protein TatC n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7S0Y8_9BURK
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
twin-arginine protein translocation system subunit TatC
SCN18_25_1_16_R1_B_scaffold_1050_10
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7987..8430)
DNA (444bp) protein (148aa)
Sec-independent protein translocase protein TatB n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN99_ACCPU
twin-arginine translocation protein subunit TatB
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SCN18_25_1_16_R1_B_scaffold_1050_11
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8549..8758)
DNA (210bp) protein (70aa)
Sec-independent protein translocase protein TatA n=1 Tax=Limnobacter sp. MED105 RepID=A6GMA4_9BURK
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
tatA; Sec-independent protein translocase protein TatA
SCN18_25_1_16_R1_B_scaffold_1050_12
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8771..9154)
DNA (384bp) protein (128aa)
Histidine triad (HIT) protein n=2 Tax=Thauera RepID=C4ZLR7_THASP
HIT family hydrolase
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCN18_25_1_16_R1_B_scaffold_1050_13
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9151..9522)
DNA (372bp) protein (124aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
Phosphoribosyl-ATP pyrophosphatase n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XN06_ALCXX
phosphoribosyl-ATP pyrophosphatase
SCN18_25_1_16_R1_B_scaffold_1050_14
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9519..9944)
DNA (426bp) protein (142aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
hisI; phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0JFX2_9PSED
SCN18_25_1_16_R1_B_scaffold_1050_15
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9931..10710)
DNA (780bp) protein (260aa)
Imidazole glycerol phosphate synthase subunit HisF n=2 Tax=Bacteria RepID=HIS6_DECAR
imidazole glycerol phosphate synthase subunit HisF
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
SCN18_25_1_16_R1_B_scaffold_1050_16
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10716..11456)
DNA (741bp) protein (247aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Thauera RepID=C4ZLR3_THASP
SCN18_25_1_16_R1_B_scaffold_1050_17
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11545..12180)
DNA (636bp) protein (212aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Thauera sp. 63 RepID=N6XJI6_9RHOO
hisH; imidazole glycerol phosphate synthase subunit
SCN18_25_1_16_R1_B_scaffold_1050_18
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12203..12790)
DNA (588bp) protein (196aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=985078 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CF2.;"
Imidazoleglycerol-phosphate dehydratase n=8 Tax=Burkholderia RepID=HIS7_BURM1
Displaying 18 items

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