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SCN18_25_1_16_R1_B_scaffold_604

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_1_16_R1_B_scaffold_604_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(266..922)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F97C3E
Alternative oxidase {ECO:0000313|EMBL:CEG07034.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
oxidase
SCN18_25_1_16_R1_B_scaffold_604_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

957..1790
DNA (834bp) protein (278aa)
cyclic nucleotide-binding protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B49B3A
Anaerobic regulatory protein {ECO:0000313|EMBL:CEG07033.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
nnrR; Nitrite and nitric oxide reductase transcriptional regulator (Crp/Fnr family)
SCN18_25_1_16_R1_B_scaffold_604_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1787..2974)
DNA (1188bp) protein (396aa)
NnrS protein involved in response to NO n=1 Tax=Rhodovulum sp. PH10 RepID=J6JCX6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN71008.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_604_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3065..3550)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SAQ1_9SPHN
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KJS39420.1}; TaxID=1629710 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. BRH_c22.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_604_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3759..7289)
DNA (3531bp) protein (1177aa)
aldehyde dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI00030D11E8
Uncharacterized protein {ECO:0000313|EMBL:EKS41745.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
aldehyde dehydrogenase
SCN18_25_1_16_R1_B_scaffold_604_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7276..7788)
DNA (513bp) protein (171aa)
Isoquinoline 1-oxidoreductase alpha subunit {ECO:0000313|EMBL:EGP08352.1}; EC=1.3.99.16 {ECO:0000313|EMBL:EGP08352.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
isoquinoline 1-oxidoreductase (EC:1.3.99.16)
(2Fe-2S)-binding protein n=1 Tax=Afipia birgiae RepID=UPI00031CEE55
SCN18_25_1_16_R1_B_scaffold_604_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8401..9870
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PVW7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42518.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
6-hydroxynicotinate reductase
SCN18_25_1_16_R1_B_scaffold_604_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9867..10781
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036CEF63
Uncharacterized protein {ECO:0000313|EMBL:EKS41748.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_604_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10774..11358
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002FBBE71
Uncharacterized protein {ECO:0000313|EMBL:EKS41749.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_604_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11355..11939
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PQG5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41750.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
peptide synthetase
SCN18_25_1_16_R1_B_scaffold_604_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12055..13275
DNA (1221bp) protein (407aa)
Putative branched-chain amino acid ABC transporter, periplasmic substrate-binding protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RQ34_9BRAD
Putative branched-chain amino acid ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:CCD84061.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
branched-chain amino acid ABC transporter substrate-binding protein
SCN18_25_1_16_R1_B_scaffold_604_12
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13394..15283
DNA (1890bp) protein (630aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PVX2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42523.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ABC transporter permease
SCN18_25_1_16_R1_B_scaffold_604_13
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15280..16071
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PNX3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42524.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ABC transporter ATP-binding protein
SCN18_25_1_16_R1_B_scaffold_604_14
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16068..16772
DNA (705bp) protein (235aa)
Putative high-affinity branched-chain amino acid transport ATP-binding protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SZH0_9BRAD
livF; high-affinity branched-chain amino acid transport ATP-binding protein
Putative high-affinity branched-chain amino acid transport ATP-binding protein {ECO:0000313|EMBL:CCD99597.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
SCN18_25_1_16_R1_B_scaffold_604_15
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16829..17287
DNA (459bp) protein (153aa)
MarR family transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036B9FEF
transcriptional regulator
Transcriptional regulatory protein {ECO:0000313|EMBL:BAC49094.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCN18_25_1_16_R1_B_scaffold_604_16
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17301..18500)
DNA (1200bp) protein (400aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKJ3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP08362.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCN18_25_1_16_R1_B_scaffold_604_17
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18694..19467
DNA (774bp) protein (258aa)
Flavodoxin reductase family protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CTD2_9BRAD
Flavodoxin reductase family protein {ECO:0000313|EMBL:EJN12304.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
mvrA; ferredoxin NADP+ reductase
SCN18_25_1_16_R1_B_scaffold_604_18
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19835..21091
DNA (1257bp) protein (419aa)
Extracellular ligand-binding receptor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3X2_9BRAD
Leu/Ile/Val/Thr-binding protein {ECO:0000313|EMBL:CEG06758.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
extracellular ligand-binding receptor protein
SCN18_25_1_16_R1_B_scaffold_604_19
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21187..23292
DNA (2106bp) protein (702aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3X3_9BRAD
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EFI52653.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
methyl-accepting chemotaxis protein
SCN18_25_1_16_R1_B_scaffold_604_20
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23398..24429)
DNA (1032bp) protein (344aa)
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GNR7_PUSST
TRAP dicarboxylate transporter-DctP subunit
TRAP dicarboxylate transporter-DctP subunit {ECO:0000313|EMBL:AEC19205.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
SCN18_25_1_16_R1_B_scaffold_604_21
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24472..25761)
DNA (1290bp) protein (430aa)
TRAP dicarboxylate transporter-DctM subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GNR6_PUSST
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KGM49132.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
TRAP dicarboxylate transporter-DctM subunit
SCN18_25_1_16_R1_B_scaffold_604_22
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25758..25979)
DNA (222bp) protein (74aa)
Displaying 22 items

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